Detail information of GWHGAAEX018677/evm.TU.scaffold_97.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672144434|ref|XP_008796117.1|1.46E-98PREDICTED: uncharacterized protein LOC103711656 isoform X1 [Phoenix dactylifera]
trEMBLtr|M0RPD8|M0RPD8_MUSAM1.00E-86Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr11P04580_001}
TAIRAT4G173506.00E-71Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000010217072141708921-
Transcript Sequence

Network for GWHGAAEX018677

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module11CYTOCHROME_P498_Family CYTOCHROME_P498_Family
CYTOCHROME_P526_Family CYTOCHROME_P526_Family
GO:0000387 spliceosomal snRNP assembly GOslim:biological_process
GO:0003968 RNA-directed RNA polymerase activity GOslim:molecular_function
GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity GOslim:molecular_function
GO:0004869 cysteine-type endopeptidase inhibitor activity GOslim:molecular_function
GO:0005681 spliceosomal complex GOslim:cellular_component
GO:0006464 cellular protein modification process GOslim:biological_process
GO:0006662 glycerol ether metabolic process GOslim:biological_process
GO:0015995 chlorophyll biosynthetic process GOslim:biological_process
GO:0034968 histone lysine methylation GOslim:biological_process
GO:0039694 viral RNA genome replication GOslim:biological_process
GO:0046406 magnesium protoporphyrin IX methyltransferase activity GOslim:molecular_function
map00780 Biotin metabolism
map03010 Ribosome
Transcription factor GRF Family Transcription factor GRF Family
Transcription factor Rcd1-like Family Transcription factor Rcd1-like Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05703.10Auxin_canalis54864.20E-11
PF05703.10Auxin_canalis1022472.00E-46
PF08458.9PH_22643682.40E-31
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.240
SRR2545915Juvenile tuber0.730
SRP108465SRR5643513five period of Gastrodia elata1.350
SRR5643514five period of Gastrodia elata1.190
SRR5643515five period of Gastrodia elata1.370
SRR5643524five period of Gastrodia elata0.560
SRR5643525five period of Gastrodia elata1.250
SRR5643528five period of Gastrodia elata0.620
SRR5643658five period of Gastrodia elata2.650
SRR5643659five period of Gastrodia elata8.410
SRR5643660five period of Gastrodia elata6.380
SRR5643661five period of Gastrodia elata12.930
SRR5643662five period of Gastrodia elata4.580
SRR5643663five period of Gastrodia elata8.970
SRR5643664five period of Gastrodia elata12.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.700
SRR6049655Rhizomagastrodiae_C368-T10_good_12.930
SRR6049656Rhizomagastrodiae_C368-T07_good_111.330
SRR6049657Rhizomagastrodiae_C368-T07_good_15.460
SRR6049658Rhizomagastrodiae_C368-T04_good_110.530
SRR6049659Rhizomagastrodiae_C368-T04_good_16.090
SRR6049660Rhizomagastrodiae_C368-T01_good_110.790
SRR6049661Rhizomagastrodiae_C368-T04_good_115.430
SRR6049662Rhizomagastrodiae_C368-T01_good_113.630
SRR6049663Rhizomagastrodiae_C368-T01_good_16.980
SRR6049664Rhizomagastrodiae_C368-T10_good_13.020
SRR6049665Rhizomagastrodiae_C368-T10_good_13.020
SRP279888GastroGastrodia elata tuber 37.06
JuvenJuvenile tuber18.40
Mother_GastroMother tuber of Gastrodia elata 2.60
Mother_JuvenMother tuber of Juvenile 6.86