Detail information of GWHGAAEX017907/evm.TU.scaffold_88.106


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00341.00E-91Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein
nrgi|212722342|ref|NP_001132034.1|2.07E-107calcineurin subunit B [Zea mays]
Swissprottr|Q9S744|CML9_ARATH9.00E-10Calmodulin-like protein 9
trEMBLtr|B6T814|B6T814_MAIZE8.00E-108Uncharacterized protein {ECO:0000313|EnsemblPlants:GRMZM2G085573_P01}
TAIRAT3G184301.00E-91Calcium-binding EF-hand family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000009531129823130070-
Transcript Sequence

Network for GWHGAAEX017907

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_7321181.30E-09
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K06268PPP3R, CNB MAPK signaling pathway map04010
Wnt signaling pathwaymap04310
VEGF signaling pathwaymap04370
Calcium signaling pathwaymap04020
cGMP-PKG signaling pathwaymap04022
Oocyte meiosismap04114
Cellular senescencemap04218
C-type lectin receptor signaling pathwaymap04625
Natural killer cell mediated cytotoxicitymap04650
T cell receptor signaling pathwaymap04660
Th1 and Th2 cell differentiationmap04658
Th17 cell differentiationmap04659
B cell receptor signaling pathwaymap04662
Glucagon signaling pathwaymap04922
Oxytocin signaling pathwaymap04921
Renin secretionmap04924
Glutamatergic synapsemap04724
Long-term potentiationmap04720
Axon guidancemap04360
Osteoclast differentiationmap04380

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms18.060
SRR2545915Juvenile tuber22.470
SRP108465SRR5643513five period of Gastrodia elata31.010
SRR5643514five period of Gastrodia elata32.150
SRR5643515five period of Gastrodia elata24.710
SRR5643524five period of Gastrodia elata27.700
SRR5643525five period of Gastrodia elata17.480
SRR5643528five period of Gastrodia elata17.300
SRR5643658five period of Gastrodia elata19.090
SRR5643659five period of Gastrodia elata19.460
SRR5643660five period of Gastrodia elata17.830
SRR5643661five period of Gastrodia elata19.120
SRR5643662five period of Gastrodia elata13.070
SRR5643663five period of Gastrodia elata16.200
SRR5643664five period of Gastrodia elata11.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.270
SRR6049655Rhizomagastrodiae_C368-T10_good_131.130
SRR6049656Rhizomagastrodiae_C368-T07_good_127.400
SRR6049657Rhizomagastrodiae_C368-T07_good_125.290
SRR6049658Rhizomagastrodiae_C368-T04_good_124.830
SRR6049659Rhizomagastrodiae_C368-T04_good_122.580
SRR6049660Rhizomagastrodiae_C368-T01_good_122.090
SRR6049661Rhizomagastrodiae_C368-T04_good_124.190
SRR6049662Rhizomagastrodiae_C368-T01_good_134.330
SRR6049663Rhizomagastrodiae_C368-T01_good_125.940
SRR6049664Rhizomagastrodiae_C368-T10_good_137.200
SRR6049665Rhizomagastrodiae_C368-T10_good_137.200
SRP279888GastroGastrodia elata tuber 27.54
JuvenJuvenile tuber23.49
Mother_GastroMother tuber of Gastrodia elata 32.35
Mother_JuvenMother tuber of Juvenile 25.34