Detail information of GWHGAAEX017177/evm.TU.scaffold_8.277


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG06764.00E-20Actin and related proteins
nrgi|700199092|gb|KGN54250.1|5.86E-25hypothetical protein Csa_4G296030 [Cucumis sativus]
Swissprottr|P30172|ACT12_SOLTU3.00E-16Actin-100 (Fragment)
trEMBLtr|A0A0A0KX77|A0A0A0KX77_CUCSA2.00E-25Uncharacterized protein {ECO:0000313|EMBL:KGN54250.1}
TAIRHS174470124.00E-20Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000041065169510651964-
Transcript Sequence

Network for GWHGAAEX017177

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module12AUX/IAA_EAR_family AUX/IAA_EAR_family
CYTOCHROME_P582_Family CYTOCHROME_P582_Family
GO:0004725 protein tyrosine phosphatase activity GOslim:molecular_function
GO:0008171 O-methyltransferase activity GOslim:molecular_function
GO:0009733 response to auxin GOslim:biological_process
GO:0010215 cellulose microfibril organization GOslim:biological_process
GO:0015079 potassium ion transmembrane transporter activity GOslim:molecular_function
GO:0031225 anchored component of membrane GOslim:cellular_component
GO:0071805 potassium ion transmembrane transport GOslim:biological_process
map02020 Two-component system
map04075 Plant hormone signal transduction
map04975 Fat digestion and absorption
Protein Kinases RLK-Pelle_WAK Family Protein Kinases RLK-Pelle_WAK Family
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2H2 Family Transcription factor C2H2 Family
Transcription factor SBP Family Transcription factor SBP Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms3.700
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata0.000
SRR5643514five period of Gastrodia elata6.780
SRR5643515five period of Gastrodia elata6.220
SRR5643524five period of Gastrodia elata2.980
SRR5643525five period of Gastrodia elata5.100
SRR5643528five period of Gastrodia elata2.900
SRR5643658five period of Gastrodia elata1.120
SRR5643659five period of Gastrodia elata8.240
SRR5643660five period of Gastrodia elata2.460
SRR5643661five period of Gastrodia elata9.460
SRR5643662five period of Gastrodia elata5.430
SRR5643663five period of Gastrodia elata6.380
SRR5643664five period of Gastrodia elata6.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.010
SRR6049655Rhizomagastrodiae_C368-T10_good_12.550
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_11.510
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_11.290
SRR6049665Rhizomagastrodiae_C368-T10_good_11.290
SRP279888GastroGastrodia elata tuber 3.67
JuvenJuvenile tuber10.74
Mother_GastroMother tuber of Gastrodia elata 24.22
Mother_JuvenMother tuber of Juvenile 6.50