Detail information of GWHGAAEX016709/evm.TU.scaffold_78.145


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|16329305|ref|NP_440033.1|4.00E-19hypothetical protein sll0225 [Synechocystis sp. PCC 6803]
nrgi|695046483|ref|XP_009411073.1|0PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.8 [Musa acuminata subsp. malaccensis]
Swissprottr|Q0D4Z6|GH38_ORYSJ0Probable indole-3-acetic acid-amido synthetase GH3.8
trEMBLtr|K4A777|K4A777_SETIT0Uncharacterized protein {ECO:0000313|EnsemblPlants:Si034733m}
TAIRAT2G149600Auxin-responsive GH3 family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000008626732282675749+
Transcript Sequence

Network for GWHGAAEX016709

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module12AUX/IAA_EAR_family AUX/IAA_EAR_family
CYTOCHROME_P582_Family CYTOCHROME_P582_Family
GO:0004725 protein tyrosine phosphatase activity GOslim:molecular_function
GO:0008171 O-methyltransferase activity GOslim:molecular_function
GO:0009733 response to auxin GOslim:biological_process
GO:0010215 cellulose microfibril organization GOslim:biological_process
GO:0015079 potassium ion transmembrane transporter activity GOslim:molecular_function
GO:0031225 anchored component of membrane GOslim:cellular_component
GO:0071805 potassium ion transmembrane transport GOslim:biological_process
map02020 Two-component system
map04075 Plant hormone signal transduction
map04975 Fat digestion and absorption
Protein Kinases RLK-Pelle_WAK Family Protein Kinases RLK-Pelle_WAK Family
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2H2 Family Transcription factor C2H2 Family
Transcription factor SBP Family Transcription factor SBP Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03321.12GH3285531.20E-163
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14487GH3 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.130
SRR2545915Juvenile tuber0.330
SRP108465SRR5643513five period of Gastrodia elata0.260
SRR5643514five period of Gastrodia elata5.460
SRR5643515five period of Gastrodia elata2.680
SRR5643524five period of Gastrodia elata5.750
SRR5643525five period of Gastrodia elata0.380
SRR5643528five period of Gastrodia elata3.290
SRR5643658five period of Gastrodia elata0.130
SRR5643659five period of Gastrodia elata0.140
SRR5643660five period of Gastrodia elata0.080
SRR5643661five period of Gastrodia elata0.040
SRR5643662five period of Gastrodia elata0.190
SRR5643663five period of Gastrodia elata0.030
SRR5643664five period of Gastrodia elata0.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.560
SRR6049655Rhizomagastrodiae_C368-T10_good_10.510
SRR6049656Rhizomagastrodiae_C368-T07_good_11.470
SRR6049657Rhizomagastrodiae_C368-T07_good_11.540
SRR6049658Rhizomagastrodiae_C368-T04_good_14.820
SRR6049659Rhizomagastrodiae_C368-T04_good_18.550
SRR6049660Rhizomagastrodiae_C368-T01_good_12.140
SRR6049661Rhizomagastrodiae_C368-T04_good_16.090
SRR6049662Rhizomagastrodiae_C368-T01_good_131.680
SRR6049663Rhizomagastrodiae_C368-T01_good_114.930
SRR6049664Rhizomagastrodiae_C368-T10_good_10.480
SRR6049665Rhizomagastrodiae_C368-T10_good_10.480
SRP279888GastroGastrodia elata tuber 0.87
JuvenJuvenile tuber0.25
Mother_GastroMother tuber of Gastrodia elata 137.90
Mother_JuvenMother tuber of Juvenile 115.30