Detail information of GWHGAAEX015959/evm.TU.scaffold_71.73


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743812478|ref|XP_010929423.1|0PREDICTED: glucan endo-1,3-beta-glucosidase 6-like [Elaeis guineensis]
Swissprottr|Q93Z08|E136_ARATH0Glucan endo-1,3-beta-glucosidase 6 (Precursor)
trEMBLtr|M0SC03|M0SC03_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P05350_001}
TAIRAT5G580900O-Glycosyl hydrolases family 17 protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007426894012696289-
Transcript Sequence

Network for GWHGAAEX015959

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module12AUX/IAA_EAR_family AUX/IAA_EAR_family
CYTOCHROME_P582_Family CYTOCHROME_P582_Family
GO:0004725 protein tyrosine phosphatase activity GOslim:molecular_function
GO:0008171 O-methyltransferase activity GOslim:molecular_function
GO:0009733 response to auxin GOslim:biological_process
GO:0010215 cellulose microfibril organization GOslim:biological_process
GO:0015079 potassium ion transmembrane transporter activity GOslim:molecular_function
GO:0031225 anchored component of membrane GOslim:cellular_component
GO:0071805 potassium ion transmembrane transport GOslim:biological_process
map02020 Two-component system
map04075 Plant hormone signal transduction
map04975 Fat digestion and absorption
Protein Kinases RLK-Pelle_WAK Family Protein Kinases RLK-Pelle_WAK Family
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2H2 Family Transcription factor C2H2 Family
Transcription factor SBP Family Transcription factor SBP Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00332.17Glyco_hydro_17253421.50E-75
PF07983.12X83624326.80E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19893GN5_6 Metabolic pathways map01100
Starch and sucrose metabolismmap00500

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms9.690
SRR2545915Juvenile tuber4.610
SRP108465SRR5643513five period of Gastrodia elata12.980
SRR5643514five period of Gastrodia elata16.340
SRR5643515five period of Gastrodia elata17.760
SRR5643524five period of Gastrodia elata18.150
SRR5643525five period of Gastrodia elata10.210
SRR5643528five period of Gastrodia elata16.050
SRR5643658five period of Gastrodia elata7.840
SRR5643659five period of Gastrodia elata4.410
SRR5643660five period of Gastrodia elata4.370
SRR5643661five period of Gastrodia elata7.000
SRR5643662five period of Gastrodia elata6.110
SRR5643663five period of Gastrodia elata4.380
SRR5643664five period of Gastrodia elata5.880
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_110.180
SRR6049655Rhizomagastrodiae_C368-T10_good_110.820
SRR6049656Rhizomagastrodiae_C368-T07_good_110.190
SRR6049657Rhizomagastrodiae_C368-T07_good_18.810
SRR6049658Rhizomagastrodiae_C368-T04_good_110.140
SRR6049659Rhizomagastrodiae_C368-T04_good_19.210
SRR6049660Rhizomagastrodiae_C368-T01_good_19.230
SRR6049661Rhizomagastrodiae_C368-T04_good_17.140
SRR6049662Rhizomagastrodiae_C368-T01_good_112.650
SRR6049663Rhizomagastrodiae_C368-T01_good_118.140
SRR6049664Rhizomagastrodiae_C368-T10_good_115.140
SRR6049665Rhizomagastrodiae_C368-T10_good_115.140
SRP279888GastroGastrodia elata tuber 6.40
JuvenJuvenile tuber6.34
Mother_GastroMother tuber of Gastrodia elata 32.14
Mother_JuvenMother tuber of Juvenile 13.57