Detail information of GWHGAAEX015887/evm.TU.scaffold_70.71


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00342.00E-07Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein
nrgi|695020981|ref|XP_009397564.1|9.07E-08PREDICTED: calcineurin B-like protein 1 isoform X2 [Musa acuminata subsp. malaccensis]
Swissprottr|Q3HRP1|CNBL6_ORYSJ6.00E-08Calcineurin B-like protein 6
trEMBLtr|M0STB9|M0STB9_MUSAM5.00E-08Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P30070_001}
TAIRAT5G559902.00E-07calcineurin B-like protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006931403013180057-
Transcript Sequence

Network for GWHGAAEX015887

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module8CYTOCHROME_P561_Family CYTOCHROME_P561_Family
CYTOCHROME_P575_Family CYTOCHROME_P575_Family
GO:0000027 ribosomal large subunit assembly GOslim:biological_process
GO:0003968 RNA-directed RNA polymerase activity GOslim:molecular_function
GO:0005986 sucrose biosynthetic process GOslim:biological_process
GO:0006281 DNA repair GOslim:biological_process
GO:0006310 DNA recombination GOslim:biological_process
GO:0006457 protein folding GOslim:biological_process
GO:0006481 C-terminal protein methylation GOslim:biological_process
GO:0008897 holo-[acyl-carrier-protein] synthase activity GOslim:molecular_function
GO:0009143 nucleoside triphosphate catabolic process GOslim:biological_process
GO:0009411 response to UV GOslim:biological_process
GO:0010038 response to metal ion GOslim:biological_process
GO:0031083 BLOC-1 complex GOslim:cellular_component
GO:0036297 interstrand cross-link repair GOslim:biological_process
GO:0043240 Fanconi anaemia nuclear complex GOslim:cellular_component
GO:0051082 unfolded protein binding GOslim:molecular_function
GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint GOslim:biological_process
MYB-related_EAR_family MYB-related_EAR_family
Transcription factor GNAT Family Transcription factor GNAT Family
Ubiquitin_E3 N-recognin_UBR-box_family Ubiquitin_E3 N-recognin_UBR-box_family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K06268PPP3R, CNB MAPK signaling pathway map04010
Wnt signaling pathwaymap04310
VEGF signaling pathwaymap04370
Calcium signaling pathwaymap04020
cGMP-PKG signaling pathwaymap04022
Oocyte meiosismap04114
Cellular senescencemap04218
C-type lectin receptor signaling pathwaymap04625
Natural killer cell mediated cytotoxicitymap04650
T cell receptor signaling pathwaymap04660
Th1 and Th2 cell differentiationmap04658
Th17 cell differentiationmap04659
B cell receptor signaling pathwaymap04662
Glucagon signaling pathwaymap04922
Oxytocin signaling pathwaymap04921
Renin secretionmap04924
Glutamatergic synapsemap04724
Long-term potentiationmap04720
Axon guidancemap04360
Osteoclast differentiationmap04380

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms7.600
SRR2545915Juvenile tuber3.720
SRP108465SRR5643513five period of Gastrodia elata0.170
SRR5643514five period of Gastrodia elata0.590
SRR5643515five period of Gastrodia elata0.160
SRR5643524five period of Gastrodia elata0.430
SRR5643525five period of Gastrodia elata1.120
SRR5643528five period of Gastrodia elata1.230
SRR5643658five period of Gastrodia elata1.530
SRR5643659five period of Gastrodia elata0.280
SRR5643660five period of Gastrodia elata0.780
SRR5643661five period of Gastrodia elata0.550
SRR5643662five period of Gastrodia elata1.010
SRR5643663five period of Gastrodia elata0.360
SRR5643664five period of Gastrodia elata0.650
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.930
SRR6049655Rhizomagastrodiae_C368-T10_good_11.870
SRR6049656Rhizomagastrodiae_C368-T07_good_11.030
SRR6049657Rhizomagastrodiae_C368-T07_good_11.350
SRR6049658Rhizomagastrodiae_C368-T04_good_11.200
SRR6049659Rhizomagastrodiae_C368-T04_good_11.940
SRR6049660Rhizomagastrodiae_C368-T01_good_10.850
SRR6049661Rhizomagastrodiae_C368-T04_good_12.010
SRR6049662Rhizomagastrodiae_C368-T01_good_10.540
SRR6049663Rhizomagastrodiae_C368-T01_good_11.070
SRR6049664Rhizomagastrodiae_C368-T10_good_10.450
SRR6049665Rhizomagastrodiae_C368-T10_good_10.450
SRP279888GastroGastrodia elata tuber 0.58
JuvenJuvenile tuber0.29
Mother_GastroMother tuber of Gastrodia elata 0.46
Mother_JuvenMother tuber of Juvenile 0.55