Detail information of GWHGAAEX015886/evm.TU.scaffold_70.69


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695006039|ref|XP_009389493.1|7.13E-159PREDICTED: uncharacterized protein LOC103976040 [Musa acuminata subsp. malaccensis]
trEMBLtr|M0S671|M0S671_MUSAM3.00E-159Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P08300_001}
TAIRAT5G114202.00E-141Protein of unknown function, DUF642

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006930873103089721-
Transcript Sequence

Network for GWHGAAEX015886

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module11CYTOCHROME_P498_Family CYTOCHROME_P498_Family
CYTOCHROME_P526_Family CYTOCHROME_P526_Family
GO:0000387 spliceosomal snRNP assembly GOslim:biological_process
GO:0003968 RNA-directed RNA polymerase activity GOslim:molecular_function
GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity GOslim:molecular_function
GO:0004869 cysteine-type endopeptidase inhibitor activity GOslim:molecular_function
GO:0005681 spliceosomal complex GOslim:cellular_component
GO:0006464 cellular protein modification process GOslim:biological_process
GO:0006662 glycerol ether metabolic process GOslim:biological_process
GO:0015995 chlorophyll biosynthetic process GOslim:biological_process
GO:0034968 histone lysine methylation GOslim:biological_process
GO:0039694 viral RNA genome replication GOslim:biological_process
GO:0046406 magnesium protoporphyrin IX methyltransferase activity GOslim:molecular_function
map00780 Biotin metabolism
map03010 Ribosome
Transcription factor GRF Family Transcription factor GRF Family
Transcription factor Rcd1-like Family Transcription factor Rcd1-like Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04862.11DUF642271862.30E-54
PF04862.11DUF6422013657.10E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.080
SRR2545915Juvenile tuber1.190
SRP108465SRR5643513five period of Gastrodia elata14.800
SRR5643514five period of Gastrodia elata11.730
SRR5643515five period of Gastrodia elata13.870
SRR5643524five period of Gastrodia elata17.470
SRR5643525five period of Gastrodia elata1.560
SRR5643528five period of Gastrodia elata0.560
SRR5643658five period of Gastrodia elata1.810
SRR5643659five period of Gastrodia elata5.430
SRR5643660five period of Gastrodia elata4.860
SRR5643661five period of Gastrodia elata9.250
SRR5643662five period of Gastrodia elata20.480
SRR5643663five period of Gastrodia elata29.340
SRR5643664five period of Gastrodia elata22.840
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_124.000
SRR6049655Rhizomagastrodiae_C368-T10_good_114.680
SRR6049656Rhizomagastrodiae_C368-T07_good_149.320
SRR6049657Rhizomagastrodiae_C368-T07_good_119.470
SRR6049658Rhizomagastrodiae_C368-T04_good_110.950
SRR6049659Rhizomagastrodiae_C368-T04_good_13.510
SRR6049660Rhizomagastrodiae_C368-T01_good_19.730
SRR6049661Rhizomagastrodiae_C368-T04_good_125.660
SRR6049662Rhizomagastrodiae_C368-T01_good_147.890
SRR6049663Rhizomagastrodiae_C368-T01_good_112.690
SRR6049664Rhizomagastrodiae_C368-T10_good_140.230
SRR6049665Rhizomagastrodiae_C368-T10_good_140.230
SRP279888GastroGastrodia elata tuber 56.17
JuvenJuvenile tuber2.37
Mother_GastroMother tuber of Gastrodia elata 1.61
Mother_JuvenMother tuber of Juvenile 1.67