Detail information of GWHGAAEX015775/evm.TU.scaffold_7.241


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|719973832|ref|XP_010243285.1|4.06E-15PREDICTED: uncharacterized protein LOC104587387 [Nelumbo nucifera]
trEMBLtr|M0T7R1|M0T7R1_MUSAM7.00E-15Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P17130_001}
TAIRAT3G522301.00E-06Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000051012078510149269+
Transcript Sequence

Network for GWHGAAEX015775

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module11CYTOCHROME_P498_Family CYTOCHROME_P498_Family
CYTOCHROME_P526_Family CYTOCHROME_P526_Family
GO:0000387 spliceosomal snRNP assembly GOslim:biological_process
GO:0003968 RNA-directed RNA polymerase activity GOslim:molecular_function
GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity GOslim:molecular_function
GO:0004869 cysteine-type endopeptidase inhibitor activity GOslim:molecular_function
GO:0005681 spliceosomal complex GOslim:cellular_component
GO:0006464 cellular protein modification process GOslim:biological_process
GO:0006662 glycerol ether metabolic process GOslim:biological_process
GO:0015995 chlorophyll biosynthetic process GOslim:biological_process
GO:0034968 histone lysine methylation GOslim:biological_process
GO:0039694 viral RNA genome replication GOslim:biological_process
GO:0046406 magnesium protoporphyrin IX methyltransferase activity GOslim:molecular_function
map00780 Biotin metabolism
map03010 Ribosome
Transcription factor GRF Family Transcription factor GRF Family
Transcription factor Rcd1-like Family Transcription factor Rcd1-like Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.920
SRR2545915Juvenile tuber10.020
SRP108465SRR5643513five period of Gastrodia elata29.720
SRR5643514five period of Gastrodia elata36.400
SRR5643515five period of Gastrodia elata28.970
SRR5643524five period of Gastrodia elata37.150
SRR5643525five period of Gastrodia elata27.490
SRR5643528five period of Gastrodia elata23.880
SRR5643658five period of Gastrodia elata21.210
SRR5643659five period of Gastrodia elata32.320
SRR5643660five period of Gastrodia elata49.290
SRR5643661five period of Gastrodia elata44.540
SRR5643662five period of Gastrodia elata41.250
SRR5643663five period of Gastrodia elata43.780
SRR5643664five period of Gastrodia elata40.790
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.710
SRR6049655Rhizomagastrodiae_C368-T10_good_110.530
SRR6049656Rhizomagastrodiae_C368-T07_good_126.970
SRR6049657Rhizomagastrodiae_C368-T07_good_123.590
SRR6049658Rhizomagastrodiae_C368-T04_good_136.230
SRR6049659Rhizomagastrodiae_C368-T04_good_137.200
SRR6049660Rhizomagastrodiae_C368-T01_good_129.760
SRR6049661Rhizomagastrodiae_C368-T04_good_131.700
SRR6049662Rhizomagastrodiae_C368-T01_good_142.560
SRR6049663Rhizomagastrodiae_C368-T01_good_147.460
SRR6049664Rhizomagastrodiae_C368-T10_good_138.220
SRR6049665Rhizomagastrodiae_C368-T10_good_138.220
SRP279888GastroGastrodia elata tuber 96.65
JuvenJuvenile tuber37.41
Mother_GastroMother tuber of Gastrodia elata 37.23
Mother_JuvenMother tuber of Juvenile 32.43