Detail information of GWHGAAEX013221/evm.TU.scaffold_5.143


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG01690Phosphoinositide-specific phospholipase C
nrgi|743842577|ref|XP_010937845.1|0PREDICTED: phosphoinositide phospholipase C 4-like isoform X2 [Elaeis guineensis]
Swissprottr|Q944C1|PLCD4_ARATH0Phosphoinositide phospholipase C 4
trEMBLtr|M0T2F1|M0T2F1_MUSAM0Phosphoinositide phospholipase C {ECO:0000256|RuleBase:RU361133}
TAIRAT5G587000phosphatidylinositol-speciwc phospholipase C4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001626532202690065+
Transcript Sequence

Network for GWHGAAEX013221

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1GO:0003677 DNA binding GOslim:molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function
GO:0004857 enzyme inhibitor activity GOslim:molecular_function
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006629 lipid metabolic process GOslim:biological_process
GO:0008081 phosphoric diester hydrolase activity GOslim:molecular_function
GO:0008234 cysteine-type peptidase activity GOslim:molecular_function
GO:0009055 electron carrier activity GOslim:molecular_function
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function
GO:0015035 protein disulfide oxidoreductase activity GOslim:molecular_function
GO:0015267 channel activity GOslim:molecular_function
GO:0016020 membrane GOslim:cellular_component
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function
GO:0016757 transferase activity, transferring glycosyl groups GOslim:molecular_function
GO:0046556 alpha-L-arabinofuranosidase activity GOslim:molecular_function
GO:0046983 protein dimerization activity GOslim:molecular_function
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2C2-Dof Family Transcription factor C2C2-Dof Family
Transcription factor NAC Family Transcription factor NAC Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00388.18PI-PLC-X1122543.10E-49
PF00387.18PI-PLC-Y3554401.20E-26
PF00168.29C24645647.30E-12
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K05857PLCD Metabolic pathways map01100
Inositol phosphate metabolismmap00562
Calcium signaling pathwaymap04020
Phosphatidylinositol signaling systemmap04070
Thyroid hormone signaling pathwaymap04919

Gene Ontology

GO term OntologyName
GO:0006629Biological Processlipid metabolic process
GO:0007165Biological Processsignal transduction
GO:0035556Biological Processintracellular signal transduction
GO:0008081Molecular Functionphosphoric diester hydrolase activity
GO:0004435Molecular Functionphosphatidylinositol phospholipase C activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms86.850
SRR2545915Juvenile tuber42.140
SRP108465SRR5643513five period of Gastrodia elata29.760
SRR5643514five period of Gastrodia elata39.320
SRR5643515five period of Gastrodia elata26.750
SRR5643524five period of Gastrodia elata32.220
SRR5643525five period of Gastrodia elata161.110
SRR5643528five period of Gastrodia elata117.780
SRR5643658five period of Gastrodia elata204.930
SRR5643659five period of Gastrodia elata23.580
SRR5643660five period of Gastrodia elata23.010
SRR5643661five period of Gastrodia elata21.410
SRR5643662five period of Gastrodia elata21.150
SRR5643663five period of Gastrodia elata18.560
SRR5643664five period of Gastrodia elata22.550
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_166.750
SRR6049655Rhizomagastrodiae_C368-T10_good_163.170
SRR6049656Rhizomagastrodiae_C368-T07_good_158.010
SRR6049657Rhizomagastrodiae_C368-T07_good_190.070
SRR6049658Rhizomagastrodiae_C368-T04_good_182.480
SRR6049659Rhizomagastrodiae_C368-T04_good_1104.920
SRR6049660Rhizomagastrodiae_C368-T01_good_181.120
SRR6049661Rhizomagastrodiae_C368-T04_good_176.400
SRR6049662Rhizomagastrodiae_C368-T01_good_170.940
SRR6049663Rhizomagastrodiae_C368-T01_good_181.200
SRR6049664Rhizomagastrodiae_C368-T10_good_144.620
SRR6049665Rhizomagastrodiae_C368-T10_good_144.620
SRP279888GastroGastrodia elata tuber 14.91
JuvenJuvenile tuber18.29
Mother_GastroMother tuber of Gastrodia elata 42.28
Mother_JuvenMother tuber of Juvenile 30.01