Detail information of GWHGAAEX013141/evm.TU.scaffold_5.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17212.00E-40FOG: Zn-finger
nrgi|672137877|ref|XP_008792675.1|1.35E-43PREDICTED: zinc finger protein ZAT10-like [Phoenix dactylifera]
Swissprottr|Q96289|ZAT10_ARATH7.00E-41Zinc finger protein ZAT10
trEMBLtr|M0SUV1|M0SUV1_MUSAM2.00E-40Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P01720_001}
TAIRAT1G277302.00E-40salt tolerance zinc finger

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000016997413998003-
Transcript Sequence

Network for GWHGAAEX013141

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4AP2/ERF-ERF_EAR_family AP2/ERF-ERF_EAR_family
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016758 transferase activity, transferring hexosyl groups GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
map00561 Glycerolipid metabolism
map04923 Regulation of lipolysis in adipocytes
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor LOB Family Transcription factor LOB Family
Transcription factor MYB Family Transcription factor MYB Family
Transcription factor NAC Family Transcription factor NAC Family
Transcription factor Tify Family Transcription factor Tify Family
Transcription factor WRKY Family Transcription factor WRKY Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_660842.20E-14
PF13912.5zf-C2H2_61021241.40E-09
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms60.910
SRR2545915Juvenile tuber56.200
SRP108465SRR5643513five period of Gastrodia elata36.670
SRR5643514five period of Gastrodia elata17.380
SRR5643515five period of Gastrodia elata107.800
SRR5643524five period of Gastrodia elata24.180
SRR5643525five period of Gastrodia elata210.360
SRR5643528five period of Gastrodia elata268.690
SRR5643658five period of Gastrodia elata138.590
SRR5643659five period of Gastrodia elata161.930
SRR5643660five period of Gastrodia elata23.000
SRR5643661five period of Gastrodia elata57.140
SRR5643662five period of Gastrodia elata127.270
SRR5643663five period of Gastrodia elata39.910
SRR5643664five period of Gastrodia elata494.860
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1258.210
SRR6049655Rhizomagastrodiae_C368-T10_good_1104.040
SRR6049656Rhizomagastrodiae_C368-T07_good_1155.650
SRR6049657Rhizomagastrodiae_C368-T07_good_1194.600
SRR6049658Rhizomagastrodiae_C368-T04_good_1199.340
SRR6049659Rhizomagastrodiae_C368-T04_good_1270.350
SRR6049660Rhizomagastrodiae_C368-T01_good_1441.320
SRR6049661Rhizomagastrodiae_C368-T04_good_1199.840
SRR6049662Rhizomagastrodiae_C368-T01_good_1125.420
SRR6049663Rhizomagastrodiae_C368-T01_good_1369.050
SRR6049664Rhizomagastrodiae_C368-T10_good_1182.490
SRR6049665Rhizomagastrodiae_C368-T10_good_1182.490
SRP279888GastroGastrodia elata tuber 69.36
JuvenJuvenile tuber8.99
Mother_GastroMother tuber of Gastrodia elata 499.61
Mother_JuvenMother tuber of Juvenile 187.43