Detail information of GWHGAAEX012682/evm.TU.scaffold_45.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|118431257|ref|NP_147591.2|1.00E-11thermosome alpha subunit [Aeropyrum pernix K1]
KOGKOG02300Phosphatidylinositol-4-phosphate 5-kinase and related FYVE finger-containing proteins
nrgi|672120212|ref|XP_008783365.1|0PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1A isoform X3 [Phoenix dactylifera]
Swissprottr|Q9XID0|FAB1D_ARATH0Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D
trEMBLtr|Q6ZJN4|Q6ZJN4_ORYSJ0Phosphatidylinositol 3,5-kinase-like {ECO:0000313|EMBL:BAD08926.1}
TAIRAT1G342600FORMS APLOID AND BINUCLEATE CELLS 1A

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005279118101332-
Transcript Sequence

Network for GWHGAAEX012682

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4AP2/ERF-ERF_EAR_family AP2/ERF-ERF_EAR_family
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016758 transferase activity, transferring hexosyl groups GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
map00561 Glycerolipid metabolism
map04923 Regulation of lipolysis in adipocytes
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor LOB Family Transcription factor LOB Family
Transcription factor MYB Family Transcription factor MYB Family
Transcription factor NAC Family Transcription factor NAC Family
Transcription factor Tify Family Transcription factor Tify Family
Transcription factor WRKY Family Transcription factor WRKY Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00118.23Cpn60_TCP12665148.70E-22
PF01504.17PIP5K140715732.60E-37
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00921PIKFYVE, FAB1 Metabolic pathways map01100
Inositol phosphate metabolismmap00562
Phosphatidylinositol signaling systemmap04070
Phagosomemap04145
Regulation of actin cytoskeletonmap04810

Gene Ontology

GO term OntologyName
GO:0046488Biological Processphosphatidylinositol metabolic process
GO:0016307Molecular Functionphosphatidylinositol phosphate kinase activity
GO:0005524Molecular FunctionATP binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms41.210
SRR2545915Juvenile tuber43.170
SRP108465SRR5643513five period of Gastrodia elata23.240
SRR5643514five period of Gastrodia elata29.190
SRR5643515five period of Gastrodia elata34.370
SRR5643524five period of Gastrodia elata29.610
SRR5643525five period of Gastrodia elata68.960
SRR5643528five period of Gastrodia elata77.030
SRR5643658five period of Gastrodia elata72.660
SRR5643659five period of Gastrodia elata22.090
SRR5643660five period of Gastrodia elata22.040
SRR5643661five period of Gastrodia elata21.470
SRR5643662five period of Gastrodia elata29.090
SRR5643663five period of Gastrodia elata25.570
SRR5643664five period of Gastrodia elata23.110
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_118.770
SRR6049655Rhizomagastrodiae_C368-T10_good_117.360
SRR6049656Rhizomagastrodiae_C368-T07_good_121.120
SRR6049657Rhizomagastrodiae_C368-T07_good_118.140
SRR6049658Rhizomagastrodiae_C368-T04_good_124.780
SRR6049659Rhizomagastrodiae_C368-T04_good_127.600
SRR6049660Rhizomagastrodiae_C368-T01_good_120.650
SRR6049661Rhizomagastrodiae_C368-T04_good_123.210
SRR6049662Rhizomagastrodiae_C368-T01_good_120.660
SRR6049663Rhizomagastrodiae_C368-T01_good_124.050
SRR6049664Rhizomagastrodiae_C368-T10_good_118.980
SRR6049665Rhizomagastrodiae_C368-T10_good_118.980
SRP279888GastroGastrodia elata tuber 23.07
JuvenJuvenile tuber22.93
Mother_GastroMother tuber of Gastrodia elata 95.14
Mother_JuvenMother tuber of Juvenile 90.35