Detail information of GWHGAAEX012365/evm.TU.scaffold_42.193


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|482886638|ref|YP_007883811.1|1.00E-18aspartate aminotransferase AspC [Mannheimia haemolytica M42548]
KOGKOG14117.00E-49Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2
nrgi|743799817|ref|XP_010925610.1|4.39E-49PREDICTED: aspartate aminotransferase, mitochondrial [Elaeis guineensis]
Swissprottr|P46643|AAT1_ARATH2.00E-49Aspartate aminotransferase, mitochondrial (Precursor)
trEMBLtr|W5H2J5|W5H2J5_WHEAT4.00E-49Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_6DS_4CA5BD5EE.1}
TAIRAT2G309707.00E-49aspartate aminotransferase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000005053124285313827+
Transcript Sequence

Network for GWHGAAEX012365

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module12AUX/IAA_EAR_family AUX/IAA_EAR_family
CYTOCHROME_P582_Family CYTOCHROME_P582_Family
GO:0004725 protein tyrosine phosphatase activity GOslim:molecular_function
GO:0008171 O-methyltransferase activity GOslim:molecular_function
GO:0009733 response to auxin GOslim:biological_process
GO:0010215 cellulose microfibril organization GOslim:biological_process
GO:0015079 potassium ion transmembrane transporter activity GOslim:molecular_function
GO:0031225 anchored component of membrane GOslim:cellular_component
GO:0071805 potassium ion transmembrane transport GOslim:biological_process
map02020 Two-component system
map04075 Plant hormone signal transduction
map04975 Fat digestion and absorption
Protein Kinases RLK-Pelle_WAK Family Protein Kinases RLK-Pelle_WAK Family
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2H2 Family Transcription factor C2H2 Family
Transcription factor SBP Family Transcription factor SBP Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00155.20Aminotran_1_21799.20E-15
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14455GOT2 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Microbial metabolism in diverse environmentsmap01120
Biosynthesis of antibioticsmap01130
Carbon metabolismmap01200
2-Oxocarboxylic acid metabolismmap01210
Biosynthesis of amino acidsmap01230
Carbon fixation in photosynthetic organismsmap00710
Pyrimidine metabolismmap00240
Cysteine and methionine metabolismmap00270
Arginine biosynthesismap00220
Arginine and proline metabolismmap00330
Tyrosine metabolismmap00350
Phenylalanine metabolismmap00360
Tryptophan metabolismmap00380
Isoquinoline alkaloid biosynthesismap00950
Fat digestion and absorptionmap04975

Gene Ontology

GO term OntologyName
GO:0009058Biological Processbiosynthetic process
GO:0030170Molecular Functionpyridoxal phosphate binding
GO:0003824Molecular Functioncatalytic activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.500
SRR2545915Juvenile tuber16.600
SRP108465SRR5643513five period of Gastrodia elata17.490
SRR5643514five period of Gastrodia elata36.310
SRR5643515five period of Gastrodia elata8.750
SRR5643524five period of Gastrodia elata12.680
SRR5643525five period of Gastrodia elata31.770
SRR5643528five period of Gastrodia elata15.400
SRR5643658five period of Gastrodia elata15.970
SRR5643659five period of Gastrodia elata12.030
SRR5643660five period of Gastrodia elata8.710
SRR5643661five period of Gastrodia elata5.540
SRR5643662five period of Gastrodia elata16.190
SRR5643663five period of Gastrodia elata17.100
SRR5643664five period of Gastrodia elata16.200
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_151.640
SRR6049655Rhizomagastrodiae_C368-T10_good_127.350
SRR6049656Rhizomagastrodiae_C368-T07_good_181.300
SRR6049657Rhizomagastrodiae_C368-T07_good_139.010
SRR6049658Rhizomagastrodiae_C368-T04_good_170.100
SRR6049659Rhizomagastrodiae_C368-T04_good_168.200
SRR6049660Rhizomagastrodiae_C368-T01_good_182.020
SRR6049661Rhizomagastrodiae_C368-T04_good_170.740
SRR6049662Rhizomagastrodiae_C368-T01_good_1131.160
SRR6049663Rhizomagastrodiae_C368-T01_good_188.680
SRR6049664Rhizomagastrodiae_C368-T10_good_172.000
SRR6049665Rhizomagastrodiae_C368-T10_good_172.000
SRP279888GastroGastrodia elata tuber 50.53
JuvenJuvenile tuber22.21
Mother_GastroMother tuber of Gastrodia elata 159.79
Mother_JuvenMother tuber of Juvenile 26.94