Detail information of GWHGAAEX011987/evm.TU.scaffold_4.342


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|37523925|ref|NP_927302.1|3.00E-32hypothetical protein gll4356 [Gloeobacter violaceus PCC 7421]
KOGKOG02660WD40 repeat-containing protein
nrgi|695076785|ref|XP_009385699.1|0PREDICTED: transcriptional corepressor LEUNIG-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9FUY2|LEUNG_ARATH0Transcriptional corepressor LEUNIG
trEMBLtr|C5XVA2|C5XVA2_SORBI0Putative uncharacterized protein Sb04g036910 {ECO:0000313|EMBL:EES07740.1}
TAIRAT2G327000LEUNIG_homolog

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001179452467979290+
Transcript Sequence

Network for GWHGAAEX011987

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08513.10LisH10351.50E-06
PF00400.31WD405165490.00025
PF00400.31WD405625910.0033
PF00400.31WD405986350.00027
PF00400.31WD406807153.00E-05
PF00400.31WD407627980.054
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyLUG
Ubiquitin FamilyDWD

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms226.560
SRR2545915Juvenile tuber214.290
SRP108465SRR5643513five period of Gastrodia elata123.770
SRR5643514five period of Gastrodia elata101.170
SRR5643515five period of Gastrodia elata111.610
SRR5643524five period of Gastrodia elata100.980
SRR5643525five period of Gastrodia elata125.190
SRR5643528five period of Gastrodia elata112.530
SRR5643658five period of Gastrodia elata156.850
SRR5643659five period of Gastrodia elata93.590
SRR5643660five period of Gastrodia elata88.460
SRR5643661five period of Gastrodia elata79.710
SRR5643662five period of Gastrodia elata91.350
SRR5643663five period of Gastrodia elata117.940
SRR5643664five period of Gastrodia elata106.630
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1135.260
SRR6049655Rhizomagastrodiae_C368-T10_good_1160.640
SRR6049656Rhizomagastrodiae_C368-T07_good_1135.910
SRR6049657Rhizomagastrodiae_C368-T07_good_1145.340
SRR6049658Rhizomagastrodiae_C368-T04_good_1163.400
SRR6049659Rhizomagastrodiae_C368-T04_good_1180.100
SRR6049660Rhizomagastrodiae_C368-T01_good_1137.230
SRR6049661Rhizomagastrodiae_C368-T04_good_1163.770
SRR6049662Rhizomagastrodiae_C368-T01_good_1107.800
SRR6049663Rhizomagastrodiae_C368-T01_good_1122.850
SRR6049664Rhizomagastrodiae_C368-T10_good_1111.430
SRR6049665Rhizomagastrodiae_C368-T10_good_1111.430
SRP279888GastroGastrodia elata tuber 134.84
JuvenJuvenile tuber177.48
Mother_GastroMother tuber of Gastrodia elata 114.41
Mother_JuvenMother tuber of Juvenile 151.63