Detail information of GWHGAAEX011924/evm.TU.scaffold_4.247


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|152996457|ref|YP_001341292.1|2.00E-322OG-Fe(II) oxygenase [Marinomonas sp. MWYL1]
KOGKOG01438.00E-88Iron/ascorbate family oxidoreductases
nrgi|743834177|ref|XP_010935462.1|4.63E-141PREDICTED: gibberellin 2-beta-dioxygenase 8-like [Elaeis guineensis]
Swissprottr|O49561|G2OX8_ARATH6.00E-113Gibberellin 2-beta-dioxygenase 8
trEMBLtr|B9RY49|B9RY49_RICCO3.00E-138Gibberellin 20-oxidase, putative {ECO:0000313|EMBL:EEF43741.1}
TAIRAT4G212008.00E-88gibberellin 2-oxidase 8

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001151212455133606-
Transcript Sequence

Network for GWHGAAEX011924

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module12AUX/IAA_EAR_family AUX/IAA_EAR_family
CYTOCHROME_P582_Family CYTOCHROME_P582_Family
GO:0004725 protein tyrosine phosphatase activity GOslim:molecular_function
GO:0008171 O-methyltransferase activity GOslim:molecular_function
GO:0009733 response to auxin GOslim:biological_process
GO:0010215 cellulose microfibril organization GOslim:biological_process
GO:0015079 potassium ion transmembrane transporter activity GOslim:molecular_function
GO:0031225 anchored component of membrane GOslim:cellular_component
GO:0071805 potassium ion transmembrane transport GOslim:biological_process
map02020 Two-component system
map04075 Plant hormone signal transduction
map04975 Fat digestion and absorption
Protein Kinases RLK-Pelle_WAK Family Protein Kinases RLK-Pelle_WAK Family
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2H2 Family Transcription factor C2H2 Family
Transcription factor SBP Family Transcription factor SBP Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14226.5DIOX_N981955.80E-16
PF03171.192OG-FeII_Oxy2553501.30E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04125E1.14.11.13 Biosynthesis of secondary metabolites map01110
Diterpenoid biosynthesismap00904

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms65.980
SRR2545915Juvenile tuber11.030
SRP108465SRR5643513five period of Gastrodia elata41.590
SRR5643514five period of Gastrodia elata8.830
SRR5643515five period of Gastrodia elata18.680
SRR5643524five period of Gastrodia elata11.960
SRR5643525five period of Gastrodia elata9.340
SRR5643528five period of Gastrodia elata7.470
SRR5643658five period of Gastrodia elata7.660
SRR5643659five period of Gastrodia elata1.930
SRR5643660five period of Gastrodia elata1.400
SRR5643661five period of Gastrodia elata1.210
SRR5643662five period of Gastrodia elata9.680
SRR5643663five period of Gastrodia elata4.390
SRR5643664five period of Gastrodia elata8.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_113.440
SRR6049655Rhizomagastrodiae_C368-T10_good_111.790
SRR6049656Rhizomagastrodiae_C368-T07_good_18.780
SRR6049657Rhizomagastrodiae_C368-T07_good_132.840
SRR6049658Rhizomagastrodiae_C368-T04_good_142.550
SRR6049659Rhizomagastrodiae_C368-T04_good_156.030
SRR6049660Rhizomagastrodiae_C368-T01_good_124.120
SRR6049661Rhizomagastrodiae_C368-T04_good_141.030
SRR6049662Rhizomagastrodiae_C368-T01_good_19.120
SRR6049663Rhizomagastrodiae_C368-T01_good_19.250
SRR6049664Rhizomagastrodiae_C368-T10_good_110.090
SRR6049665Rhizomagastrodiae_C368-T10_good_110.090
SRP279888GastroGastrodia elata tuber 10.18
JuvenJuvenile tuber2.26
Mother_GastroMother tuber of Gastrodia elata 95.27
Mother_JuvenMother tuber of Juvenile 34.38