Detail information of GWHGAAEX011729/evm.TU.scaffold_4.30


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17213.00E-27FOG: Zn-finger
nrgi|695063176|ref|XP_009420085.1|1.36E-44PREDICTED: zinc finger protein ZAT12-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q681X4|ZAT5_ARATH9.00E-28Zinc finger protein ZAT5
trEMBLtr|M0RF47|M0RF47_MUSAM5.00E-45Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P03700_001}
TAIRAT2G282003.00E-27C2H2-type zinc finger family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000011503778505247-
Transcript Sequence

Network for GWHGAAEX011729

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4AP2/ERF-ERF_EAR_family AP2/ERF-ERF_EAR_family
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016758 transferase activity, transferring hexosyl groups GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
map00561 Glycerolipid metabolism
map04923 Regulation of lipolysis in adipocytes
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor LOB Family Transcription factor LOB Family
Transcription factor MYB Family Transcription factor MYB Family
Transcription factor NAC Family Transcription factor NAC Family
Transcription factor Tify Family Transcription factor Tify Family
Transcription factor WRKY Family Transcription factor WRKY Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_657823.40E-12
PF13912.5zf-C2H2_6991235.30E-10
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.050
SRR2545915Juvenile tuber5.680
SRP108465SRR5643513five period of Gastrodia elata9.890
SRR5643514five period of Gastrodia elata7.440
SRR5643515five period of Gastrodia elata18.790
SRR5643524five period of Gastrodia elata10.140
SRR5643525five period of Gastrodia elata28.860
SRR5643528five period of Gastrodia elata16.350
SRR5643658five period of Gastrodia elata10.830
SRR5643659five period of Gastrodia elata15.520
SRR5643660five period of Gastrodia elata2.610
SRR5643661five period of Gastrodia elata7.070
SRR5643662five period of Gastrodia elata16.740
SRR5643663five period of Gastrodia elata8.550
SRR5643664five period of Gastrodia elata12.530
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.200
SRR6049655Rhizomagastrodiae_C368-T10_good_112.300
SRR6049656Rhizomagastrodiae_C368-T07_good_19.510
SRR6049657Rhizomagastrodiae_C368-T07_good_19.110
SRR6049658Rhizomagastrodiae_C368-T04_good_112.810
SRR6049659Rhizomagastrodiae_C368-T04_good_114.260
SRR6049660Rhizomagastrodiae_C368-T01_good_111.160
SRR6049661Rhizomagastrodiae_C368-T04_good_114.790
SRR6049662Rhizomagastrodiae_C368-T01_good_15.700
SRR6049663Rhizomagastrodiae_C368-T01_good_16.700
SRR6049664Rhizomagastrodiae_C368-T10_good_19.870
SRR6049665Rhizomagastrodiae_C368-T10_good_19.870
SRP279888GastroGastrodia elata tuber 10.46
JuvenJuvenile tuber2.10
Mother_GastroMother tuber of Gastrodia elata 485.32
Mother_JuvenMother tuber of Juvenile 141.13