Detail information of GWHGAAEX011547/evm.TU.scaffold_38.126
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
KOG | KOG1030 | 9.00E-61 | Predicted Ca2+-dependent phospholipid-binding protein |
nr | gi|695068338|ref|XP_009381107.1| | 4.47E-74 | PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 isoform X1 [Musa acuminata subsp. malaccensis] |
Swissprot | tr|Q8L7A4|AGD11_ARATH | 2.00E-42 | Probable ADP-ribosylation factor GTPase-activating protein AGD11 |
trEMBL | tr|M0RLR5|M0RLR5_MUSAM | 2.00E-74 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P26910_001} |
TAIR | AT1G73580 | 9.00E-61 | Calcium-dependent lipid-binding (CaLB domain) family protein |
Location And Transcript Sequence
Scaffold | Start | End | Strand |
---|---|---|---|
GWHAAEX00000041 | 3749427 | 3750905 | - |
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Transcript Sequence | |||
Network for GWHGAAEX011547
Network category | Network | Top300 PCC genelist |
---|---|---|
Coexpression Positive | Network | Top300 PCC genelist |
Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
Module ID | Function Annotation |
---|---|
Module12 | AUX/IAA_EAR_family AUX/IAA_EAR_family CYTOCHROME_P582_Family CYTOCHROME_P582_Family GO:0004725 protein tyrosine phosphatase activity GOslim:molecular_function GO:0008171 O-methyltransferase activity GOslim:molecular_function GO:0009733 response to auxin GOslim:biological_process GO:0010215 cellulose microfibril organization GOslim:biological_process GO:0015079 potassium ion transmembrane transporter activity GOslim:molecular_function GO:0031225 anchored component of membrane GOslim:cellular_component GO:0071805 potassium ion transmembrane transport GOslim:biological_process map02020 Two-component system map04075 Plant hormone signal transduction map04975 Fat digestion and absorption Protein Kinases RLK-Pelle_WAK Family Protein Kinases RLK-Pelle_WAK Family Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family Transcription factor C2H2 Family Transcription factor C2H2 Family Transcription factor SBP Family Transcription factor SBP Family |
Protein Structure
Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|
PF00168.29 | C2 | 8 | 95 | 8.20E-25 |
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Protein Sequence |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
KO | Enzyme | pathway | mapID |
---|---|---|---|
-- | -- | -- | -- |
Gene Ontology
GO term | Ontology | Name |
---|
Expression pattern
SRP | Sample | Description | FPKM |
---|---|---|---|
SRP064423 | SRR2545914 | vegetative propagation corms | 41.530 |
SRR2545915 | Juvenile tuber | 20.950 | |
SRP108465 | SRR5643513 | five period of Gastrodia elata | 36.870 |
SRR5643514 | five period of Gastrodia elata | 31.720 | |
SRR5643515 | five period of Gastrodia elata | 22.450 | |
SRR5643524 | five period of Gastrodia elata | 22.980 | |
SRR5643525 | five period of Gastrodia elata | 17.310 | |
SRR5643528 | five period of Gastrodia elata | 15.190 | |
SRR5643658 | five period of Gastrodia elata | 8.180 | |
SRR5643659 | five period of Gastrodia elata | 25.620 | |
SRR5643660 | five period of Gastrodia elata | 30.560 | |
SRR5643661 | five period of Gastrodia elata | 24.670 | |
SRR5643662 | five period of Gastrodia elata | 28.850 | |
SRR5643663 | five period of Gastrodia elata | 21.490 | |
SRR5643664 | five period of Gastrodia elata | 36.730 | |
SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 29.460 |
SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 16.710 | |
SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 20.020 | |
SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 31.380 | |
SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 22.810 | |
SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 29.070 | |
SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 22.710 | |
SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 19.820 | |
SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 19.800 | |
SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 22.390 | |
SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 30.780 | |
SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 30.780 | |
SRP279888 | Gastro | Gastrodia elata tuber | 46.35 |
Juven | Juvenile tuber | 55.08 | |
Mother_Gastro | Mother tuber of Gastrodia elata | 185.63 | |
Mother_Juven | Mother tuber of Juvenile | 123.22 |