Detail information of GWHGAAEX011459/evm.TU.scaffold_38.24


Functional Annotation

DatabaseOrthologsE valueAnnotation

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000041764235764889+
Transcript Sequence

Network for GWHGAAEX011459

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K05862VDAC1 Calcium signaling pathway map04020
cGMP-PKG signaling pathwaymap04022
Necroptosismap04217
Cellular senescencemap04218
NOD-like receptor signaling pathwaymap04621
Cholesterol metabolismmap04979

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.150
SRR2545915Juvenile tuber0.170
SRP108465SRR5643513five period of Gastrodia elata0.320
SRR5643514five period of Gastrodia elata0.000
SRR5643515five period of Gastrodia elata0.300
SRR5643524five period of Gastrodia elata0.000
SRR5643525five period of Gastrodia elata0.170
SRR5643528five period of Gastrodia elata0.820
SRR5643658five period of Gastrodia elata0.120
SRR5643659five period of Gastrodia elata0.260
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.150
SRR5643662five period of Gastrodia elata0.730
SRR5643663five period of Gastrodia elata0.220
SRR5643664five period of Gastrodia elata0.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.000
SRR6049657Rhizomagastrodiae_C368-T07_good_10.120
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.000
SRR6049660Rhizomagastrodiae_C368-T01_good_10.000
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.000
SRR6049664Rhizomagastrodiae_C368-T10_good_10.000
SRR6049665Rhizomagastrodiae_C368-T10_good_10.000
SRP279888GastroGastrodia elata tuber 0.15
JuvenJuvenile tuber0.05
Mother_GastroMother tuber of Gastrodia elata 0.68
Mother_JuvenMother tuber of Juvenile 0.49