Detail information of GWHGAAEX011330/evm.TU.scaffold_37.73


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17211.00E-25FOG: Zn-finger
nrgi|695061269|ref|XP_009419061.1|5.76E-38PREDICTED: zinc finger protein AZF3-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q42430|ZFP1_WHEAT4.00E-27Zinc finger protein 1
trEMBLtr|K0A0J9|K0A0J9_ELAGV2.00E-35Zinc-finger protein {ECO:0000313|EMBL:AFS65093.1} (Fragment)
TAIRAT3G499301.00E-25C2H2 and C2HC zinc fingers superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000004319043571905401+
Transcript Sequence

Network for GWHGAAEX011330

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module12AUX/IAA_EAR_family AUX/IAA_EAR_family
CYTOCHROME_P582_Family CYTOCHROME_P582_Family
GO:0004725 protein tyrosine phosphatase activity GOslim:molecular_function
GO:0008171 O-methyltransferase activity GOslim:molecular_function
GO:0009733 response to auxin GOslim:biological_process
GO:0010215 cellulose microfibril organization GOslim:biological_process
GO:0015079 potassium ion transmembrane transporter activity GOslim:molecular_function
GO:0031225 anchored component of membrane GOslim:cellular_component
GO:0071805 potassium ion transmembrane transport GOslim:biological_process
map02020 Two-component system
map04075 Plant hormone signal transduction
map04975 Fat digestion and absorption
Protein Kinases RLK-Pelle_WAK Family Protein Kinases RLK-Pelle_WAK Family
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2H2 Family Transcription factor C2H2 Family
Transcription factor SBP Family Transcription factor SBP Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_670943.90E-11
PF13912.5zf-C2H2_61131352.90E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.450
SRR2545915Juvenile tuber42.050
SRP108465SRR5643513five period of Gastrodia elata44.690
SRR5643514five period of Gastrodia elata41.510
SRR5643515five period of Gastrodia elata84.860
SRR5643524five period of Gastrodia elata55.410
SRR5643525five period of Gastrodia elata12.590
SRR5643528five period of Gastrodia elata64.370
SRR5643658five period of Gastrodia elata11.990
SRR5643659five period of Gastrodia elata36.450
SRR5643660five period of Gastrodia elata20.540
SRR5643661five period of Gastrodia elata24.120
SRR5643662five period of Gastrodia elata35.250
SRR5643663five period of Gastrodia elata17.980
SRR5643664five period of Gastrodia elata33.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.430
SRR6049655Rhizomagastrodiae_C368-T10_good_194.640
SRR6049656Rhizomagastrodiae_C368-T07_good_130.340
SRR6049657Rhizomagastrodiae_C368-T07_good_125.340
SRR6049658Rhizomagastrodiae_C368-T04_good_134.320
SRR6049659Rhizomagastrodiae_C368-T04_good_129.180
SRR6049660Rhizomagastrodiae_C368-T01_good_117.840
SRR6049661Rhizomagastrodiae_C368-T04_good_118.960
SRR6049662Rhizomagastrodiae_C368-T01_good_137.070
SRR6049663Rhizomagastrodiae_C368-T01_good_147.110
SRR6049664Rhizomagastrodiae_C368-T10_good_148.550
SRR6049665Rhizomagastrodiae_C368-T10_good_148.550
SRP279888GastroGastrodia elata tuber 40.03
JuvenJuvenile tuber56.38
Mother_GastroMother tuber of Gastrodia elata 433.37
Mother_JuvenMother tuber of Juvenile 297.96