Detail information of GWHGAAEX011067/evm.TU.scaffold_34.126


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG15619.00E-40CCAAT-binding factor, subunit B (HAP2)
nrgi|695020667|ref|XP_009397392.1|1.54E-66PREDICTED: nuclear transcription factor Y subunit A-7-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q84JP1|NFYA7_ARATH1.00E-45Nuclear transcription factor Y subunit A-7
trEMBLtr|M0STS7|M0STS7_MUSAM6.00E-67Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P31650_001}
TAIRAT2G347209.00E-40nuclear factor Y, subunit A4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003760389556066367-
Transcript Sequence

Network for GWHGAAEX011067

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02045.14CBFB_NFYA1071621.20E-26
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyNF-YA

KEGG pathway

KO Enzyme pathway mapID
K08064NFYA Antigen processing and presentation map04612

Gene Ontology

GO term OntologyName
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016602Cellular ComponentCCAAT-binding factor complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.470
SRR2545915Juvenile tuber25.370
SRP108465SRR5643513five period of Gastrodia elata20.560
SRR5643514five period of Gastrodia elata19.040
SRR5643515five period of Gastrodia elata19.160
SRR5643524five period of Gastrodia elata19.660
SRR5643525five period of Gastrodia elata20.970
SRR5643528five period of Gastrodia elata16.860
SRR5643658five period of Gastrodia elata20.520
SRR5643659five period of Gastrodia elata21.960
SRR5643660five period of Gastrodia elata19.670
SRR5643661five period of Gastrodia elata21.530
SRR5643662five period of Gastrodia elata20.410
SRR5643663five period of Gastrodia elata18.820
SRR5643664five period of Gastrodia elata21.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.440
SRR6049655Rhizomagastrodiae_C368-T10_good_121.740
SRR6049656Rhizomagastrodiae_C368-T07_good_117.200
SRR6049657Rhizomagastrodiae_C368-T07_good_121.830
SRR6049658Rhizomagastrodiae_C368-T04_good_119.770
SRR6049659Rhizomagastrodiae_C368-T04_good_117.540
SRR6049660Rhizomagastrodiae_C368-T01_good_118.960
SRR6049661Rhizomagastrodiae_C368-T04_good_118.930
SRR6049662Rhizomagastrodiae_C368-T01_good_116.980
SRR6049663Rhizomagastrodiae_C368-T01_good_115.900
SRR6049664Rhizomagastrodiae_C368-T10_good_117.990
SRR6049665Rhizomagastrodiae_C368-T10_good_117.990
SRP279888GastroGastrodia elata tuber 24.60
JuvenJuvenile tuber27.31
Mother_GastroMother tuber of Gastrodia elata 25.66
Mother_JuvenMother tuber of Juvenile 29.78