Detail information of GWHGAAEX010243/evm.TU.scaffold_28.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|312136771|ref|YP_004004108.1|1.00E-09glycoside hydrolase [Methanothermus fervidus DSM 2088]
KOGKOG19580Glycosyl hydrolase, family 38 - alpha-mannosidase
nrgi|743766394|ref|XP_010913437.1|0PREDICTED: alpha-mannosidase 2x [Elaeis guineensis]
Swissprottr|C0HJB3|MANA_CANEN1.00E-86Alpha-mannosidase, light subunit {ECO:0000303|PubMed:24221485}
trEMBLtr|C5Z7K3|C5Z7K3_SORBI0Alpha-mannosidase {ECO:0000256|RuleBase:RU361199}
TAIRAT5G149500golgi alpha-mannosidase II

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002729690992989794-
Transcript Sequence

Network for GWHGAAEX010243

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01074.21Glyco_hydro_381635023.40E-100
PF09261.10Alpha-mann_mid5085911.20E-20
PF07748.12Glyco_hydro_38C65311538.40E-68
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH38

KEGG pathway

KO Enzyme pathway mapID
K01231MAN2 Metabolic pathways map01100
N-Glycan biosynthesismap00510
Various types of N-glycan biosynthesismap00513

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0006013Biological Processmannose metabolic process
GO:0003824Molecular Functioncatalytic activity
GO:0030246Molecular Functioncarbohydrate binding
GO:0004559Molecular Functionalpha-mannosidase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms69.450
SRR2545915Juvenile tuber67.080
SRP108465SRR5643513five period of Gastrodia elata28.500
SRR5643514five period of Gastrodia elata33.850
SRR5643515five period of Gastrodia elata31.220
SRR5643524five period of Gastrodia elata32.830
SRR5643525five period of Gastrodia elata53.250
SRR5643528five period of Gastrodia elata47.290
SRR5643658five period of Gastrodia elata56.130
SRR5643659five period of Gastrodia elata44.560
SRR5643660five period of Gastrodia elata54.030
SRR5643661five period of Gastrodia elata47.490
SRR5643662five period of Gastrodia elata45.400
SRR5643663five period of Gastrodia elata47.580
SRR5643664five period of Gastrodia elata50.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_163.390
SRR6049655Rhizomagastrodiae_C368-T10_good_145.610
SRR6049656Rhizomagastrodiae_C368-T07_good_154.820
SRR6049657Rhizomagastrodiae_C368-T07_good_168.760
SRR6049658Rhizomagastrodiae_C368-T04_good_185.420
SRR6049659Rhizomagastrodiae_C368-T04_good_196.150
SRR6049660Rhizomagastrodiae_C368-T01_good_173.880
SRR6049661Rhizomagastrodiae_C368-T04_good_180.570
SRR6049662Rhizomagastrodiae_C368-T01_good_159.510
SRR6049663Rhizomagastrodiae_C368-T01_good_168.120
SRR6049664Rhizomagastrodiae_C368-T10_good_142.820
SRR6049665Rhizomagastrodiae_C368-T10_good_142.820
SRP279888GastroGastrodia elata tuber 55.29
JuvenJuvenile tuber43.61
Mother_GastroMother tuber of Gastrodia elata 27.49
Mother_JuvenMother tuber of Juvenile 40.49