Detail information of GWHGAAEX009873/evm.TU.scaffold_26.111


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|186683200|ref|YP_001866396.1|2.00E-35signal transduction protein [Nostoc punctiforme PCC 73102]
KOGKOG00274.00E-103Calmodulin and related proteins (EF-Hand superfamily)
nrgi|674956350|emb|CDX77060.1|2.55E-102BnaC04g38550D [Brassica napus]
Swissprottr|P62201|CALM_LILLO1.00E-103Calmodulin
trEMBLtr|Q5CC36|Q5CC36_QUEPE2.00E-102Calmodulin {ECO:0000313|EMBL:CAH57708.1}
trEMBLtr|Q5CC36|Q5CC36_QUEPE2.00E-10Calmodulin {ECO:0000313|EMBL:CAH57708.1}
TAIRAT3G438104.00E-103calmodulin 7

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002942109024225383+
Transcript Sequence

Network for GWHGAAEX009873

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1GO:0003677 DNA binding GOslim:molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function
GO:0004857 enzyme inhibitor activity GOslim:molecular_function
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006629 lipid metabolic process GOslim:biological_process
GO:0008081 phosphoric diester hydrolase activity GOslim:molecular_function
GO:0008234 cysteine-type peptidase activity GOslim:molecular_function
GO:0009055 electron carrier activity GOslim:molecular_function
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function
GO:0015035 protein disulfide oxidoreductase activity GOslim:molecular_function
GO:0015267 channel activity GOslim:molecular_function
GO:0016020 membrane GOslim:cellular_component
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function
GO:0016757 transferase activity, transferring glycosyl groups GOslim:molecular_function
GO:0046556 alpha-L-arabinofuranosidase activity GOslim:molecular_function
GO:0046983 protein dimerization activity GOslim:molecular_function
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2C2-Dof Family Transcription factor C2C2-Dof Family
Transcription factor NAC Family Transcription factor NAC Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13499.5EF-hand_712738.70E-15
PF13499.5EF-hand_7831462.00E-17
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02183CALM Ras signaling pathway map04014
Rap1 signaling pathwaymap04015
MAPK signaling pathway - plantmap04016
Apelin signaling pathwaymap04371
Calcium signaling pathwaymap04020
Phosphatidylinositol signaling systemmap04070
cAMP signaling pathwaymap04024
cGMP-PKG signaling pathwaymap04022
Oocyte meiosismap04114
Cellular senescencemap04218
C-type lectin receptor signaling pathwaymap04625
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922
GnRH signaling pathwaymap04912
Estrogen signaling pathwaymap04915
Oxytocin signaling pathwaymap04921
Melanogenesismap04916
Renin secretionmap04924
Aldosterone synthesis and secretionmap04925
Adrenergic signaling in cardiomyocytesmap04261
Vascular smooth muscle contractionmap04270
Salivary secretionmap04970
Gastric acid secretionmap04971
Dopaminergic synapsemap04728
Long-term potentiationmap04720
Neurotrophin signaling pathwaymap04722
Phototransductionmap04744
Phototransduction - flymap04745
Olfactory transductionmap04740
Inflammatory mediator regulation of TRP channelsmap04750
Circadian entrainmentmap04713
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms57.330
SRR2545915Juvenile tuber81.580
SRP108465SRR5643513five period of Gastrodia elata203.140
SRR5643514five period of Gastrodia elata118.760
SRR5643515five period of Gastrodia elata200.760
SRR5643524five period of Gastrodia elata152.020
SRR5643525five period of Gastrodia elata219.400
SRR5643528five period of Gastrodia elata260.670
SRR5643658five period of Gastrodia elata185.160
SRR5643659five period of Gastrodia elata91.300
SRR5643660five period of Gastrodia elata74.880
SRR5643661five period of Gastrodia elata118.220
SRR5643662five period of Gastrodia elata85.000
SRR5643663five period of Gastrodia elata92.480
SRR5643664five period of Gastrodia elata56.590
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_198.510
SRR6049655Rhizomagastrodiae_C368-T10_good_145.670
SRR6049656Rhizomagastrodiae_C368-T07_good_1144.020
SRR6049657Rhizomagastrodiae_C368-T07_good_175.560
SRR6049658Rhizomagastrodiae_C368-T04_good_154.550
SRR6049659Rhizomagastrodiae_C368-T04_good_137.480
SRR6049660Rhizomagastrodiae_C368-T01_good_173.530
SRR6049661Rhizomagastrodiae_C368-T04_good_183.720
SRR6049662Rhizomagastrodiae_C368-T01_good_1206.880
SRR6049663Rhizomagastrodiae_C368-T01_good_1165.980
SRR6049664Rhizomagastrodiae_C368-T10_good_1147.500
SRR6049665Rhizomagastrodiae_C368-T10_good_1147.500
SRP279888GastroGastrodia elata tuber 62.15
JuvenJuvenile tuber30.64
Mother_GastroMother tuber of Gastrodia elata 39.67
Mother_JuvenMother tuber of Juvenile 20.15