Detail information of GWHGAAEX009562/evm.TU.scaffold_25.175


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|255582168|ref|XP_002531878.1|8.58E-44RALFL33, putative [Ricinus communis]
Swissprottr|Q8L9P8|RLF33_ARATH3.00E-37Protein RALF-like 33 (Precursor)
trEMBLtr|B9T0V9|B9T0V9_RICCO3.00E-44RALFL33, putative {ECO:0000313|EMBL:EEF30515.1}
TAIRAT1G029003.00E-32rapid alkalinization factor 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000003055588445559724-
Transcript Sequence

Network for GWHGAAEX009562

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4AP2/ERF-ERF_EAR_family AP2/ERF-ERF_EAR_family
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016758 transferase activity, transferring hexosyl groups GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
map00561 Glycerolipid metabolism
map04923 Regulation of lipolysis in adipocytes
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor LOB Family Transcription factor LOB Family
Transcription factor MYB Family Transcription factor MYB Family
Transcription factor NAC Family Transcription factor NAC Family
Transcription factor Tify Family Transcription factor Tify Family
Transcription factor WRKY Family Transcription factor WRKY Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF05498.10RALF631231.10E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms109.880
SRR2545915Juvenile tuber194.720
SRP108465SRR5643513five period of Gastrodia elata192.340
SRR5643514five period of Gastrodia elata136.290
SRR5643515five period of Gastrodia elata404.730
SRR5643524five period of Gastrodia elata145.500
SRR5643525five period of Gastrodia elata411.040
SRR5643528five period of Gastrodia elata546.110
SRR5643658five period of Gastrodia elata296.530
SRR5643659five period of Gastrodia elata144.500
SRR5643660five period of Gastrodia elata79.140
SRR5643661five period of Gastrodia elata106.930
SRR5643662five period of Gastrodia elata165.270
SRR5643663five period of Gastrodia elata131.840
SRR5643664five period of Gastrodia elata209.830
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1180.310
SRR6049655Rhizomagastrodiae_C368-T10_good_1265.530
SRR6049656Rhizomagastrodiae_C368-T07_good_1163.690
SRR6049657Rhizomagastrodiae_C368-T07_good_1154.130
SRR6049658Rhizomagastrodiae_C368-T04_good_185.250
SRR6049659Rhizomagastrodiae_C368-T04_good_190.190
SRR6049660Rhizomagastrodiae_C368-T01_good_1177.580
SRR6049661Rhizomagastrodiae_C368-T04_good_196.130
SRR6049662Rhizomagastrodiae_C368-T01_good_1164.900
SRR6049663Rhizomagastrodiae_C368-T01_good_1183.420
SRR6049664Rhizomagastrodiae_C368-T10_good_1188.680
SRR6049665Rhizomagastrodiae_C368-T10_good_1188.680
SRP279888GastroGastrodia elata tuber 56.30
JuvenJuvenile tuber102.20
Mother_GastroMother tuber of Gastrodia elata 898.23
Mother_JuvenMother tuber of Juvenile 415.90