Detail information of GWHGAAEX009271/evm.TU.scaffold_241.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|565354498|ref|XP_006344147.1|5.10E-21PREDICTED: zinc finger protein 6-like [Solanum tuberosum]
Swissprottr|Q39265|ZFP6_ARATH2.00E-20Zinc finger protein 6
trEMBLtr|M1B5S5|M1B5S5_SOLTU2.00E-21Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400037720}
TAIRAT1G670307.00E-20zinc finger protein 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000238197220197773-
Transcript Sequence

Network for GWHGAAEX009271

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module10GO:0004869 cysteine-type endopeptidase inhibitor activity GOslim:molecular_function
GO:0008146 sulfotransferase activity GOslim:molecular_function
GO:0008171 O-methyltransferase activity GOslim:molecular_function

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_629535.50E-06
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.560
SRR2545915Juvenile tuber3.370
SRP108465SRR5643513five period of Gastrodia elata5.490
SRR5643514five period of Gastrodia elata4.800
SRR5643515five period of Gastrodia elata0.790
SRR5643524five period of Gastrodia elata1.720
SRR5643525five period of Gastrodia elata0.680
SRR5643528five period of Gastrodia elata0.210
SRR5643658five period of Gastrodia elata0.650
SRR5643659five period of Gastrodia elata0.170
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.570
SRR5643663five period of Gastrodia elata0.290
SRR5643664five period of Gastrodia elata0.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.760
SRR6049655Rhizomagastrodiae_C368-T10_good_117.250
SRR6049656Rhizomagastrodiae_C368-T07_good_16.040
SRR6049657Rhizomagastrodiae_C368-T07_good_12.560
SRR6049658Rhizomagastrodiae_C368-T04_good_12.590
SRR6049659Rhizomagastrodiae_C368-T04_good_11.880
SRR6049660Rhizomagastrodiae_C368-T01_good_12.110
SRR6049661Rhizomagastrodiae_C368-T04_good_12.150
SRR6049662Rhizomagastrodiae_C368-T01_good_12.430
SRR6049663Rhizomagastrodiae_C368-T01_good_11.430
SRR6049664Rhizomagastrodiae_C368-T10_good_18.200
SRR6049665Rhizomagastrodiae_C368-T10_good_18.200
SRP279888GastroGastrodia elata tuber 1.00
JuvenJuvenile tuber0.00
Mother_GastroMother tuber of Gastrodia elata 1.02
Mother_JuvenMother tuber of Juvenile 0.31