Detail information of GWHGAAEX009035/evm.TU.scaffold_231.8


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00341.00E-128Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein
nrgi|672178924|ref|XP_008809614.1|5.82E-137PREDICTED: calcineurin B-like protein 3 [Phoenix dactylifera]
Swissprottr|Q75LU8|CNBL3_ORYSJ2.00E-134Calcineurin B-like protein 3
trEMBLtr|A5BYS8|A5BYS8_VITVI3.00E-135Calcineurin B-like protein 02 {ECO:0000313|EMBL:ACQ83556.1}
TAIRAT4G265701.00E-128calcineurin B-like 3

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000229176259227728+
Transcript Sequence

Network for GWHGAAEX009035

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13833.5EF-hand_8641080.00015
PF13499.5EF-hand_71221876.40E-08
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06268PPP3R, CNB MAPK signaling pathway map04010
Wnt signaling pathwaymap04310
VEGF signaling pathwaymap04370
Calcium signaling pathwaymap04020
cGMP-PKG signaling pathwaymap04022
Oocyte meiosismap04114
Cellular senescencemap04218
C-type lectin receptor signaling pathwaymap04625
Natural killer cell mediated cytotoxicitymap04650
T cell receptor signaling pathwaymap04660
Th1 and Th2 cell differentiationmap04658
Th17 cell differentiationmap04659
B cell receptor signaling pathwaymap04662
Glucagon signaling pathwaymap04922
Oxytocin signaling pathwaymap04921
Renin secretionmap04924
Glutamatergic synapsemap04724
Long-term potentiationmap04720
Axon guidancemap04360
Osteoclast differentiationmap04380

Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms88.320
SRR2545915Juvenile tuber108.750
SRP108465SRR5643513five period of Gastrodia elata41.900
SRR5643514five period of Gastrodia elata49.060
SRR5643515five period of Gastrodia elata41.610
SRR5643524five period of Gastrodia elata47.580
SRR5643525five period of Gastrodia elata48.340
SRR5643528five period of Gastrodia elata44.250
SRR5643658five period of Gastrodia elata51.000
SRR5643659five period of Gastrodia elata47.260
SRR5643660five period of Gastrodia elata33.340
SRR5643661five period of Gastrodia elata40.600
SRR5643662five period of Gastrodia elata48.240
SRR5643663five period of Gastrodia elata55.300
SRR5643664five period of Gastrodia elata43.350
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_150.760
SRR6049655Rhizomagastrodiae_C368-T10_good_150.990
SRR6049656Rhizomagastrodiae_C368-T07_good_139.880
SRR6049657Rhizomagastrodiae_C368-T07_good_138.370
SRR6049658Rhizomagastrodiae_C368-T04_good_145.410
SRR6049659Rhizomagastrodiae_C368-T04_good_146.990
SRR6049660Rhizomagastrodiae_C368-T01_good_141.800
SRR6049661Rhizomagastrodiae_C368-T04_good_130.570
SRR6049662Rhizomagastrodiae_C368-T01_good_133.570
SRR6049663Rhizomagastrodiae_C368-T01_good_136.530
SRR6049664Rhizomagastrodiae_C368-T10_good_142.060
SRR6049665Rhizomagastrodiae_C368-T10_good_142.060
SRP279888GastroGastrodia elata tuber 65.47
JuvenJuvenile tuber44.14
Mother_GastroMother tuber of Gastrodia elata 35.99
Mother_JuvenMother tuber of Juvenile 34.25