Detail information of GWHGAAEX008803/evm.TU.scaffold_23.108
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| nr | gi|743839934|ref|XP_010937137.1| | 0 | PREDICTED: uncharacterized protein LOC105056586 [Elaeis guineensis] |
| trEMBL | tr|M0TJD9|M0TJD9_MUSAM | 2.00E-179 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P21020_001} |
| TAIR | AT5G39780 | 9.00E-104 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000025 | 2742045 | 2745650 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX008803
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module12 | AUX/IAA_EAR_family AUX/IAA_EAR_family CYTOCHROME_P582_Family CYTOCHROME_P582_Family GO:0004725 protein tyrosine phosphatase activity GOslim:molecular_function GO:0008171 O-methyltransferase activity GOslim:molecular_function GO:0009733 response to auxin GOslim:biological_process GO:0010215 cellulose microfibril organization GOslim:biological_process GO:0015079 potassium ion transmembrane transporter activity GOslim:molecular_function GO:0031225 anchored component of membrane GOslim:cellular_component GO:0071805 potassium ion transmembrane transport GOslim:biological_process map02020 Two-component system map04075 Plant hormone signal transduction map04975 Fat digestion and absorption Protein Kinases RLK-Pelle_WAK Family Protein Kinases RLK-Pelle_WAK Family Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family Transcription factor C2H2 Family Transcription factor C2H2 Family Transcription factor SBP Family Transcription factor SBP Family |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF07891.11 | DUF1666 | 514 | 757 | 8.30E-96 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 10.880 |
| SRR2545915 | Juvenile tuber | 8.390 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 7.940 |
| SRR5643514 | five period of Gastrodia elata | 9.950 | |
| SRR5643515 | five period of Gastrodia elata | 8.420 | |
| SRR5643524 | five period of Gastrodia elata | 10.920 | |
| SRR5643525 | five period of Gastrodia elata | 13.140 | |
| SRR5643528 | five period of Gastrodia elata | 10.770 | |
| SRR5643658 | five period of Gastrodia elata | 14.390 | |
| SRR5643659 | five period of Gastrodia elata | 3.140 | |
| SRR5643660 | five period of Gastrodia elata | 3.160 | |
| SRR5643661 | five period of Gastrodia elata | 5.340 | |
| SRR5643662 | five period of Gastrodia elata | 6.590 | |
| SRR5643663 | five period of Gastrodia elata | 5.840 | |
| SRR5643664 | five period of Gastrodia elata | 6.890 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.890 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 3.230 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 4.340 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 3.840 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 4.700 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 6.530 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 2.660 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.090 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 4.720 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 4.850 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 6.750 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 6.750 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 6.55 |
| Juven | Juvenile tuber | 4.53 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 21.59 | |
| Mother_Juven | Mother tuber of Juvenile | 9.21 |