Detail information of GWHGAAEX007952/evm.TU.scaffold_208.45


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|116623982|ref|YP_826138.1|1.00E-08hypothetical protein Acid_4894 [Candidatus Solibacter usitatus Ellin6076]
KOGKOG15724.00E-98Predicted protein tyrosine phosphatase
nrgi|703153206|ref|XP_010110621.1|4.88E-108putative tyrosine-protein phosphatase [Morus notabilis]
Swissprottr|Q9ZVN4|Y1500_ARATH1.00E-98Probable tyrosine-protein phosphatase At1g05000
trEMBLtr|W9SG98|W9SG98_9ROSA2.00E-108Putative tyrosine-protein phosphatase {ECO:0000313|EMBL:EXC27243.1}
TAIRAT1G050004.00E-98Phosphotyrosine protein phosphatases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000209927440954853-
Transcript Sequence

Network for GWHGAAEX007952

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module12AUX/IAA_EAR_family AUX/IAA_EAR_family
CYTOCHROME_P582_Family CYTOCHROME_P582_Family
GO:0004725 protein tyrosine phosphatase activity GOslim:molecular_function
GO:0008171 O-methyltransferase activity GOslim:molecular_function
GO:0009733 response to auxin GOslim:biological_process
GO:0010215 cellulose microfibril organization GOslim:biological_process
GO:0015079 potassium ion transmembrane transporter activity GOslim:molecular_function
GO:0031225 anchored component of membrane GOslim:cellular_component
GO:0071805 potassium ion transmembrane transport GOslim:biological_process
map02020 Two-component system
map04075 Plant hormone signal transduction
map04975 Fat digestion and absorption
Protein Kinases RLK-Pelle_WAK Family Protein Kinases RLK-Pelle_WAK Family
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2H2 Family Transcription factor C2H2 Family
Transcription factor SBP Family Transcription factor SBP Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03162.12Y_phosphatase2301814.50E-60
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016311Biological Processdephosphorylation
GO:0004725Molecular Functionprotein tyrosine phosphatase activity
GO:0016791Molecular Functionphosphatase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.410
SRR2545915Juvenile tuber18.580
SRP108465SRR5643513five period of Gastrodia elata25.530
SRR5643514five period of Gastrodia elata41.160
SRR5643515five period of Gastrodia elata36.350
SRR5643524five period of Gastrodia elata41.140
SRR5643525five period of Gastrodia elata27.480
SRR5643528five period of Gastrodia elata48.140
SRR5643658five period of Gastrodia elata20.190
SRR5643659five period of Gastrodia elata12.860
SRR5643660five period of Gastrodia elata23.950
SRR5643661five period of Gastrodia elata18.920
SRR5643662five period of Gastrodia elata28.520
SRR5643663five period of Gastrodia elata25.090
SRR5643664five period of Gastrodia elata19.320
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.680
SRR6049655Rhizomagastrodiae_C368-T10_good_139.420
SRR6049656Rhizomagastrodiae_C368-T07_good_129.610
SRR6049657Rhizomagastrodiae_C368-T07_good_126.000
SRR6049658Rhizomagastrodiae_C368-T04_good_125.490
SRR6049659Rhizomagastrodiae_C368-T04_good_122.000
SRR6049660Rhizomagastrodiae_C368-T01_good_124.040
SRR6049661Rhizomagastrodiae_C368-T04_good_120.590
SRR6049662Rhizomagastrodiae_C368-T01_good_131.130
SRR6049663Rhizomagastrodiae_C368-T01_good_139.100
SRR6049664Rhizomagastrodiae_C368-T10_good_136.080
SRR6049665Rhizomagastrodiae_C368-T10_good_136.080
SRP279888GastroGastrodia elata tuber 25.70
JuvenJuvenile tuber31.20
Mother_GastroMother tuber of Gastrodia elata 119.20
Mother_JuvenMother tuber of Juvenile 87.78