Detail information of GWHGAAEX007917/evm.TU.scaffold_208.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|359488169|ref|XP_002280652.2|1.87E-18PREDICTED: zinc finger protein 6 [Vitis vinifera]
Swissprottr|Q39265|ZFP6_ARATH6.00E-17Zinc finger protein 6
trEMBLtr|D7TT15|D7TT15_VITVI7.00E-19Putative uncharacterized protein {ECO:0000313|EMBL:CBI33637.3}
TAIRAT1G670302.00E-16zinc finger protein 6

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000209163545164315+
Transcript Sequence

Network for GWHGAAEX007917

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module12AUX/IAA_EAR_family AUX/IAA_EAR_family
CYTOCHROME_P582_Family CYTOCHROME_P582_Family
GO:0004725 protein tyrosine phosphatase activity GOslim:molecular_function
GO:0008171 O-methyltransferase activity GOslim:molecular_function
GO:0009733 response to auxin GOslim:biological_process
GO:0010215 cellulose microfibril organization GOslim:biological_process
GO:0015079 potassium ion transmembrane transporter activity GOslim:molecular_function
GO:0031225 anchored component of membrane GOslim:cellular_component
GO:0071805 potassium ion transmembrane transport GOslim:biological_process
map02020 Two-component system
map04075 Plant hormone signal transduction
map04975 Fat digestion and absorption
Protein Kinases RLK-Pelle_WAK Family Protein Kinases RLK-Pelle_WAK Family
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2H2 Family Transcription factor C2H2 Family
Transcription factor SBP Family Transcription factor SBP Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.110
SRR2545915Juvenile tuber21.170
SRP108465SRR5643513five period of Gastrodia elata31.660
SRR5643514five period of Gastrodia elata25.720
SRR5643515five period of Gastrodia elata24.250
SRR5643524five period of Gastrodia elata17.620
SRR5643525five period of Gastrodia elata2.070
SRR5643528five period of Gastrodia elata1.810
SRR5643658five period of Gastrodia elata4.680
SRR5643659five period of Gastrodia elata9.650
SRR5643660five period of Gastrodia elata10.340
SRR5643661five period of Gastrodia elata12.110
SRR5643662five period of Gastrodia elata8.120
SRR5643663five period of Gastrodia elata9.820
SRR5643664five period of Gastrodia elata5.280
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_127.840
SRR6049655Rhizomagastrodiae_C368-T10_good_195.020
SRR6049656Rhizomagastrodiae_C368-T07_good_136.400
SRR6049657Rhizomagastrodiae_C368-T07_good_122.830
SRR6049658Rhizomagastrodiae_C368-T04_good_126.350
SRR6049659Rhizomagastrodiae_C368-T04_good_126.630
SRR6049660Rhizomagastrodiae_C368-T01_good_129.780
SRR6049661Rhizomagastrodiae_C368-T04_good_130.630
SRR6049662Rhizomagastrodiae_C368-T01_good_137.790
SRR6049663Rhizomagastrodiae_C368-T01_good_128.840
SRR6049664Rhizomagastrodiae_C368-T10_good_155.160
SRR6049665Rhizomagastrodiae_C368-T10_good_155.160
SRP279888GastroGastrodia elata tuber 10.75
JuvenJuvenile tuber12.80
Mother_GastroMother tuber of Gastrodia elata 115.26
Mother_JuvenMother tuber of Juvenile 34.95