Detail information of GWHGAAEX007820/evm.TU.scaffold_205.33


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|374316722|ref|YP_005063150.1|5.00E-17response regulator containing a CheY-like receiver domain and an HD-GYP domain [Sphaerochaeta pleomorpha str. Grapes]
KOGKOG16012.00E-63GATA-4/5/6 transcription factors
nrgi|695069596|ref|XP_009381784.1|2.76E-78PREDICTED: two-component response regulator ARR10-like [Musa acuminata subsp. malaccensis]
Swissprottr|O49397|ARR10_ARATH6.00E-64Two-component response regulator ARR10
trEMBLtr|M0RKU0|M0RKU0_MUSAM2.00E-73Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr10P23650_001}
TAIRAT4G319202.00E-63response regulator 10

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000218585535588648-
Transcript Sequence

Network for GWHGAAEX007820

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00072.23Response_reg221295.50E-22
PF00249.30Myb_DNA-binding1812312.30E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGARP-ARR-B

KEGG pathway

KO Enzyme pathway mapID
K14491ARR-B Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.170
SRR2545915Juvenile tuber0.320
SRP108465SRR5643513five period of Gastrodia elata0.060
SRR5643514five period of Gastrodia elata0.040
SRR5643515five period of Gastrodia elata0.110
SRR5643524five period of Gastrodia elata0.050
SRR5643525five period of Gastrodia elata0.170
SRR5643528five period of Gastrodia elata0.240
SRR5643658five period of Gastrodia elata0.140
SRR5643659five period of Gastrodia elata0.000
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.110
SRR5643662five period of Gastrodia elata0.110
SRR5643663five period of Gastrodia elata0.160
SRR5643664five period of Gastrodia elata0.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.000
SRR6049655Rhizomagastrodiae_C368-T10_good_10.410
SRR6049656Rhizomagastrodiae_C368-T07_good_10.080
SRR6049657Rhizomagastrodiae_C368-T07_good_10.120
SRR6049658Rhizomagastrodiae_C368-T04_good_10.100
SRR6049659Rhizomagastrodiae_C368-T04_good_10.060
SRR6049660Rhizomagastrodiae_C368-T01_good_10.220
SRR6049661Rhizomagastrodiae_C368-T04_good_10.050
SRR6049662Rhizomagastrodiae_C368-T01_good_10.000
SRR6049663Rhizomagastrodiae_C368-T01_good_10.080
SRR6049664Rhizomagastrodiae_C368-T10_good_10.400
SRR6049665Rhizomagastrodiae_C368-T10_good_10.400
SRP279888GastroGastrodia elata tuber 0.30
JuvenJuvenile tuber0.12
Mother_GastroMother tuber of Gastrodia elata 0.84
Mother_JuvenMother tuber of Juvenile 0.40