Detail information of GWHGAAEX007731/evm.TU.scaffold_201.58


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672127103|ref|XP_008787013.1|2.74E-104PREDICTED: protein YABBY 4-like [Phoenix dactylifera]
Swissprottr|O22152|YAB1_ARATH2.00E-79Axial regulator YABBY 1
trEMBLtr|M0TPL1|M0TPL1_MUSAM1.00E-102Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P11580_001}
TAIRAT2G451906.00E-79Plant-specific transcription factor YABBY family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000020813605361362660-
Transcript Sequence

Network for GWHGAAEX007731

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2C2H2_EAR_family C2H2_EAR_family
GO:0000786 nucleosome GOslim:cellular_component
GO:0003677 DNA binding GOslim:molecular_function
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0003993 acid phosphatase activity GOslim:molecular_function
GO:0004190 aspartic-type endopeptidase activity GOslim:molecular_function
GO:0004252 serine-type endopeptidase activity GOslim:molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function
GO:0004601 peroxidase activity GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor GOslim:molecular_function
GO:0004857 enzyme inhibitor activity GOslim:molecular_function
GO:0005384 manganese ion transmembrane transporter activity GOslim:molecular_function
GO:0005507 copper ion binding GOslim:molecular_function
GO:0005524 ATP binding GOslim:molecular_function
GO:0005576 extracellular region GOslim:cellular_component
GO:0005634 nucleus GOslim:cellular_component
GO:0005971 ribonucleoside-diphosphate reductase complex GOslim:cellular_component
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006270 DNA replication initiation GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0006508 proteolysis GOslim:biological_process
GO:0006979 response to oxidative stress GOslim:biological_process
GO:0008236 serine-type peptidase activity GOslim:molecular_function
GO:0008271 secondary active sulfate transmembrane transporter activity GOslim:molecular_function
GO:0008272 sulfate transport GOslim:biological_process
GO:0009055 electron carrier activity GOslim:molecular_function
GO:0010427 abscisic acid binding GOslim:molecular_function
GO:0015116 sulfate transmembrane transporter activity GOslim:molecular_function
GO:0015267 channel activity GOslim:molecular_function
GO:0015297 antiporter activity GOslim:molecular_function
GO:0016020 membrane GOslim:cellular_component
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016788 hydrolase activity, acting on ester bonds GOslim:molecular_function
GO:0016853 isomerase activity GOslim:molecular_function
GO:0016887 ATPase activity GOslim:molecular_function
GO:0020037 heme binding GOslim:molecular_function
GO:0030026 cellular manganese ion homeostasis GOslim:biological_process
GO:0030246 carbohydrate binding GOslim:molecular_function
GO:0038023 signaling receptor activity GOslim:molecular_function
GO:0042555 MCM complex GOslim:cellular_component
GO:0042626 ATPase activity, coupled to transmembrane movement of substances GOslim:molecular_function
GO:0042744 hydrogen peroxide catabolic process GOslim:biological_process
GO:0042910 xenobiotic transporter activity GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
GO:0046982 protein heterodimerization activity GOslim:molecular_function
GO:0048038 quinone binding GOslim:molecular_function
GO:0050660 flavin adenine dinucleotide binding GOslim:molecular_function
GO:0055085 transmembrane transport GOslim:biological_process
GO:0055114 oxidation-reduction process GOslim:biological_process
GO:0070008 serine-type exopeptidase activity GOslim:molecular_function
GO:0098599 palmitoyl hydrolase activity GOslim:molecular_function
map00062 Fatty acid elongation
map00904 Diterpenoid biosynthesis
map00940 Phenylpropanoid biosynthesis
map01100 Metabolic pathways
map01110 Biosynthesis of secondary metabolites
map02010 ABC transporters
map04614 Renin-angiotensin system
map04976 Bile secretion
Protein Kinases RLK-Pelle_LRR-III Family Protein Kinases RLK-Pelle_LRR-III Family
Protein Kinases RLK-Pelle_LRR-XIV Family Protein Kinases RLK-Pelle_LRR-XIV Family
Transcription factor AP2/ERF-AP2 Family Transcription factor AP2/ERF-AP2 Family
Transcription factor C2H2 Family Transcription factor C2H2 Family
Transcription factor GRAS Family Transcription factor GRAS Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04690.12YABBY171845.00E-71
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2C2-YABBY

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0007275Biological Processmulticellular organism development

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.300
SRR2545915Juvenile tuber3.100
SRP108465SRR5643513five period of Gastrodia elata12.980
SRR5643514five period of Gastrodia elata13.760
SRR5643515five period of Gastrodia elata5.900
SRR5643524five period of Gastrodia elata13.770
SRR5643525five period of Gastrodia elata3.760
SRR5643528five period of Gastrodia elata0.160
SRR5643658five period of Gastrodia elata0.060
SRR5643659five period of Gastrodia elata3.570
SRR5643660five period of Gastrodia elata0.560
SRR5643661five period of Gastrodia elata0.640
SRR5643662five period of Gastrodia elata0.140
SRR5643663five period of Gastrodia elata0.160
SRR5643664five period of Gastrodia elata0.450
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.240
SRR6049655Rhizomagastrodiae_C368-T10_good_111.640
SRR6049656Rhizomagastrodiae_C368-T07_good_17.360
SRR6049657Rhizomagastrodiae_C368-T07_good_14.220
SRR6049658Rhizomagastrodiae_C368-T04_good_14.800
SRR6049659Rhizomagastrodiae_C368-T04_good_11.490
SRR6049660Rhizomagastrodiae_C368-T01_good_12.560
SRR6049661Rhizomagastrodiae_C368-T04_good_19.160
SRR6049662Rhizomagastrodiae_C368-T01_good_112.070
SRR6049663Rhizomagastrodiae_C368-T01_good_14.760
SRR6049664Rhizomagastrodiae_C368-T10_good_16.760
SRR6049665Rhizomagastrodiae_C368-T10_good_16.760
SRP279888GastroGastrodia elata tuber 0.26
JuvenJuvenile tuber3.26
Mother_GastroMother tuber of Gastrodia elata 3.74
Mother_JuvenMother tuber of Juvenile 4.29