Detail information of GWHGAAEX007687/evm.TU.scaffold_200.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|71907234|ref|YP_284821.1|2.00E-12protein kinase:GAF [Dechloromonas aromatica RCB]
KOGKOG11871.00E-95Serine/threonine protein kinase
nrgi|743778423|ref|XP_010919672.1|3.11E-132PREDICTED: putative kinase-like protein TMKL1 [Elaeis guineensis]
Swissprottr|P33543|TMKL1_ARATH2.00E-53Putative kinase-like protein TMKL1 (Precursor)
trEMBLtr|M0RW77|M0RW77_MUSAM6.00E-123Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr1P01690_001}
TAIRAT5G076201.00E-95Protein kinase superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000019813995921402119-
Transcript Sequence

Network for GWHGAAEX007687

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3CYTOCHROME_P507_Family CYTOCHROME_P507_Family
CYTOCHROME_P517_Family CYTOCHROME_P517_Family
CYTOCHROME_P530_Family CYTOCHROME_P530_Family
CYTOCHROME_P545_Family CYTOCHROME_P545_Family
CYTOCHROME_P553_Family CYTOCHROME_P553_Family
Glycoside Hydrolases 16 Glycoside Hydrolases 16
GlycosylTransferases 35 GlycosylTransferases 35
GO:0005618 cell wall GOslim:cellular_component
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006021 inositol biosynthetic process GOslim:biological_process
GO:0006073 cellular glucan metabolic process GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006457 protein folding GOslim:biological_process
GO:0006629 lipid metabolic process GOslim:biological_process
GO:0007166 cell surface receptor signaling pathway GOslim:biological_process
GO:0008202 steroid metabolic process GOslim:biological_process
GO:0008299 isoprenoid biosynthetic process GOslim:biological_process
GO:0010411 xyloglucan metabolic process GOslim:biological_process
GO:0015846 polyamine transport GOslim:biological_process
GO:0030001 metal ion transport GOslim:biological_process
GO:0042026 protein refolding GOslim:biological_process
GO:0042546 cell wall biogenesis GOslim:biological_process
GO:0042597 periplasmic space GOslim:cellular_component
GO:0048046 apoplast GOslim:cellular_component
HB-HD-ZIP_EAR_family HB-HD-ZIP_EAR_family
Protein Kinases RLK-Pelle_LRR-Xb-1 Family Protein Kinases RLK-Pelle_LRR-Xb-1 Family
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor bHLH Family Transcription factor bHLH Family
Transcription factor C2C2-GATA Family Transcription factor C2C2-GATA Family
Transcription factor HB-HD-ZIP Family Transcription factor HB-HD-ZIP Family
Transcription factor HSF Family Transcription factor HSF Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.24Pkinase1293513.00E-26
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_LRR-III

KEGG pathway

KO Enzyme pathway mapID
K04733IRAK4 MAPK signaling pathway map04010
NF-kappa B signaling pathwaymap04064
Toll-like receptor signaling pathwaymap04620
Toll and Imd signaling pathwaymap04624
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.310
SRR2545915Juvenile tuber1.300
SRP108465SRR5643513five period of Gastrodia elata2.280
SRR5643514five period of Gastrodia elata4.330
SRR5643515five period of Gastrodia elata4.470
SRR5643524five period of Gastrodia elata3.560
SRR5643525five period of Gastrodia elata8.810
SRR5643528five period of Gastrodia elata6.990
SRR5643658five period of Gastrodia elata6.010
SRR5643659five period of Gastrodia elata9.560
SRR5643660five period of Gastrodia elata11.520
SRR5643661five period of Gastrodia elata9.650
SRR5643662five period of Gastrodia elata10.240
SRR5643663five period of Gastrodia elata8.310
SRR5643664five period of Gastrodia elata7.870
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.950
SRR6049655Rhizomagastrodiae_C368-T10_good_12.230
SRR6049656Rhizomagastrodiae_C368-T07_good_13.400
SRR6049657Rhizomagastrodiae_C368-T07_good_13.910
SRR6049658Rhizomagastrodiae_C368-T04_good_13.130
SRR6049659Rhizomagastrodiae_C368-T04_good_12.380
SRR6049660Rhizomagastrodiae_C368-T01_good_13.640
SRR6049661Rhizomagastrodiae_C368-T04_good_13.140
SRR6049662Rhizomagastrodiae_C368-T01_good_15.770
SRR6049663Rhizomagastrodiae_C368-T01_good_15.180
SRR6049664Rhizomagastrodiae_C368-T10_good_14.820
SRR6049665Rhizomagastrodiae_C368-T10_good_14.820
SRP279888GastroGastrodia elata tuber 6.08
JuvenJuvenile tuber1.41
Mother_GastroMother tuber of Gastrodia elata 4.44
Mother_JuvenMother tuber of Juvenile 1.39