Detail information of GWHGAAEX007589/evm.TU.scaffold_20.77


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|434403183|ref|YP_007146068.1|2.00E-35chitinase [Cylindrospermum stagnale PCC 7417]
KOGKOG28061.00E-80Chitinase
nrgi|695044110|ref|XP_009409787.1|3.36E-119PREDICTED: acidic mammalian chitinase-like isoform X2 [Musa acuminata subsp. malaccensis]
trEMBLtr|W1PL78|W1PL78_AMBTC3.00E-119Uncharacterized protein {ECO:0000313|EMBL:ERN08436.1}
TAIRAT4G198101.00E-80Glycosyl hydrolase family protein with chitinase insertion domain

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002641903394192507-
Transcript Sequence

Network for GWHGAAEX007589

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2C2H2_EAR_family C2H2_EAR_family
GO:0000786 nucleosome GOslim:cellular_component
GO:0003677 DNA binding GOslim:molecular_function
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0003993 acid phosphatase activity GOslim:molecular_function
GO:0004190 aspartic-type endopeptidase activity GOslim:molecular_function
GO:0004252 serine-type endopeptidase activity GOslim:molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function
GO:0004601 peroxidase activity GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor GOslim:molecular_function
GO:0004857 enzyme inhibitor activity GOslim:molecular_function
GO:0005384 manganese ion transmembrane transporter activity GOslim:molecular_function
GO:0005507 copper ion binding GOslim:molecular_function
GO:0005524 ATP binding GOslim:molecular_function
GO:0005576 extracellular region GOslim:cellular_component
GO:0005634 nucleus GOslim:cellular_component
GO:0005971 ribonucleoside-diphosphate reductase complex GOslim:cellular_component
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006270 DNA replication initiation GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0006508 proteolysis GOslim:biological_process
GO:0006979 response to oxidative stress GOslim:biological_process
GO:0008236 serine-type peptidase activity GOslim:molecular_function
GO:0008271 secondary active sulfate transmembrane transporter activity GOslim:molecular_function
GO:0008272 sulfate transport GOslim:biological_process
GO:0009055 electron carrier activity GOslim:molecular_function
GO:0010427 abscisic acid binding GOslim:molecular_function
GO:0015116 sulfate transmembrane transporter activity GOslim:molecular_function
GO:0015267 channel activity GOslim:molecular_function
GO:0015297 antiporter activity GOslim:molecular_function
GO:0016020 membrane GOslim:cellular_component
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016788 hydrolase activity, acting on ester bonds GOslim:molecular_function
GO:0016853 isomerase activity GOslim:molecular_function
GO:0016887 ATPase activity GOslim:molecular_function
GO:0020037 heme binding GOslim:molecular_function
GO:0030026 cellular manganese ion homeostasis GOslim:biological_process
GO:0030246 carbohydrate binding GOslim:molecular_function
GO:0038023 signaling receptor activity GOslim:molecular_function
GO:0042555 MCM complex GOslim:cellular_component
GO:0042626 ATPase activity, coupled to transmembrane movement of substances GOslim:molecular_function
GO:0042744 hydrogen peroxide catabolic process GOslim:biological_process
GO:0042910 xenobiotic transporter activity GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
GO:0046982 protein heterodimerization activity GOslim:molecular_function
GO:0048038 quinone binding GOslim:molecular_function
GO:0050660 flavin adenine dinucleotide binding GOslim:molecular_function
GO:0055085 transmembrane transport GOslim:biological_process
GO:0055114 oxidation-reduction process GOslim:biological_process
GO:0070008 serine-type exopeptidase activity GOslim:molecular_function
GO:0098599 palmitoyl hydrolase activity GOslim:molecular_function
map00062 Fatty acid elongation
map00904 Diterpenoid biosynthesis
map00940 Phenylpropanoid biosynthesis
map01100 Metabolic pathways
map01110 Biosynthesis of secondary metabolites
map02010 ABC transporters
map04614 Renin-angiotensin system
map04976 Bile secretion
Protein Kinases RLK-Pelle_LRR-III Family Protein Kinases RLK-Pelle_LRR-III Family
Protein Kinases RLK-Pelle_LRR-XIV Family Protein Kinases RLK-Pelle_LRR-XIV Family
Transcription factor AP2/ERF-AP2 Family Transcription factor AP2/ERF-AP2 Family
Transcription factor C2H2 Family Transcription factor C2H2 Family
Transcription factor GRAS Family Transcription factor GRAS Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00704.27Glyco_hydro_18283631.80E-62
Protein Sequence

Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH18
Carbohydrate-Active enzymes FamilyGH18
Carbohydrate-Active enzymes FamilyGH18
Carbohydrate-Active enzymes FamilyGH18
Carbohydrate-Active enzymes FamilyGH18
Carbohydrate-Active enzymes FamilyGH18
Carbohydrate-Active enzymes FamilyGH18
Carbohydrate-Active enzymes FamilyGH18

KEGG pathway

KO Enzyme pathway mapID
K01183E3.2.1.14 Metabolic pathways map01100
Amino sugar and nucleotide sugar metabolismmap00520

Gene Ontology

GO term OntologyName
GO:0005975Biological Processcarbohydrate metabolic process
GO:0008061Molecular Functionchitin binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.980
SRR2545915Juvenile tuber3.390
SRP108465SRR5643513five period of Gastrodia elata111.810
SRR5643514five period of Gastrodia elata105.580
SRR5643515five period of Gastrodia elata94.990
SRR5643524five period of Gastrodia elata103.560
SRR5643525five period of Gastrodia elata1.470
SRR5643528five period of Gastrodia elata0.150
SRR5643658five period of Gastrodia elata0.520
SRR5643659five period of Gastrodia elata1.600
SRR5643660five period of Gastrodia elata2.420
SRR5643661five period of Gastrodia elata2.600
SRR5643662five period of Gastrodia elata2.240
SRR5643663five period of Gastrodia elata1.750
SRR5643664five period of Gastrodia elata3.730
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1140.100
SRR6049655Rhizomagastrodiae_C368-T10_good_1210.750
SRR6049656Rhizomagastrodiae_C368-T07_good_1246.100
SRR6049657Rhizomagastrodiae_C368-T07_good_175.960
SRR6049658Rhizomagastrodiae_C368-T04_good_199.310
SRR6049659Rhizomagastrodiae_C368-T04_good_194.750
SRR6049660Rhizomagastrodiae_C368-T01_good_152.820
SRR6049661Rhizomagastrodiae_C368-T04_good_165.490
SRR6049662Rhizomagastrodiae_C368-T01_good_1167.250
SRR6049663Rhizomagastrodiae_C368-T01_good_1131.620
SRR6049664Rhizomagastrodiae_C368-T10_good_1448.580
SRR6049665Rhizomagastrodiae_C368-T10_good_1448.580
SRP279888GastroGastrodia elata tuber 2.69
JuvenJuvenile tuber14.42
Mother_GastroMother tuber of Gastrodia elata 191.96
Mother_JuvenMother tuber of Juvenile 162.00