Detail information of GWHGAAEX007288/evm.TU.scaffold_2.72


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743862581|ref|XP_010943572.1|0PREDICTED: transcription factor HBP-1b(c38)-like [Elaeis guineensis]
Swissprottr|O24160|TGA21_TOBAC2.00E-126TGACG-sequence-specific DNA-binding protein TGA-2.1
trEMBLtr|A0A061EYD6|A0A061EYD6_THECC0BZIP transcription factor family protein {ECO:0000313|EMBL:EOY09442.1}
TAIRAT5G068404.00E-154Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001028873162897642+
Transcript Sequence

Network for GWHGAAEX007288

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4AP2/ERF-ERF_EAR_family AP2/ERF-ERF_EAR_family
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016758 transferase activity, transferring hexosyl groups GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
map00561 Glycerolipid metabolism
map04923 Regulation of lipolysis in adipocytes
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor LOB Family Transcription factor LOB Family
Transcription factor MYB Family Transcription factor MYB Family
Transcription factor NAC Family Transcription factor NAC Family
Transcription factor Tify Family Transcription factor Tify Family
Transcription factor WRKY Family Transcription factor WRKY Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00170.20bZIP_11321722.30E-08
PF14144.5DOG12232976.00E-32
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilybZIP

KEGG pathway

KO Enzyme pathway mapID
K14431TGA Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0006351Biological Processtranscription, DNA-templated
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.570
SRR2545915Juvenile tuber8.910
SRP108465SRR5643513five period of Gastrodia elata1.300
SRR5643514five period of Gastrodia elata0.890
SRR5643515five period of Gastrodia elata1.060
SRR5643524five period of Gastrodia elata1.220
SRR5643525five period of Gastrodia elata0.050
SRR5643528five period of Gastrodia elata0.170
SRR5643658five period of Gastrodia elata0.040
SRR5643659five period of Gastrodia elata0.830
SRR5643660five period of Gastrodia elata1.360
SRR5643661five period of Gastrodia elata1.340
SRR5643662five period of Gastrodia elata1.260
SRR5643663five period of Gastrodia elata0.460
SRR5643664five period of Gastrodia elata0.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.970
SRR6049655Rhizomagastrodiae_C368-T10_good_18.220
SRR6049656Rhizomagastrodiae_C368-T07_good_17.450
SRR6049657Rhizomagastrodiae_C368-T07_good_19.430
SRR6049658Rhizomagastrodiae_C368-T04_good_111.230
SRR6049659Rhizomagastrodiae_C368-T04_good_110.440
SRR6049660Rhizomagastrodiae_C368-T01_good_18.170
SRR6049661Rhizomagastrodiae_C368-T04_good_113.310
SRR6049662Rhizomagastrodiae_C368-T01_good_14.820
SRR6049663Rhizomagastrodiae_C368-T01_good_16.290
SRR6049664Rhizomagastrodiae_C368-T10_good_13.160
SRR6049665Rhizomagastrodiae_C368-T10_good_13.160
SRP279888GastroGastrodia elata tuber 4.44
JuvenJuvenile tuber3.22
Mother_GastroMother tuber of Gastrodia elata 9.78
Mother_JuvenMother tuber of Juvenile 44.09