Detail information of GWHGAAEX007279/evm.TU.scaffold_2.59


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG20026.00E-35TPR-containing nuclear phosphoprotein that regulates K(+) uptake
nrgi|743881249|ref|XP_010908854.1|1.90E-50PREDICTED: RNA polymerase-associated protein CTR9 homolog [Elaeis guineensis]
trEMBLtr|W5GM63|W5GM63_WHEAT3.00E-50Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_6BL_B926FE5D6.1} (Fragment)
TAIRAT2G062106.00E-35binding

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001022305612233916-
Transcript Sequence

Network for GWHGAAEX007279

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module11CYTOCHROME_P498_Family CYTOCHROME_P498_Family
CYTOCHROME_P526_Family CYTOCHROME_P526_Family
GO:0000387 spliceosomal snRNP assembly GOslim:biological_process
GO:0003968 RNA-directed RNA polymerase activity GOslim:molecular_function
GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity GOslim:molecular_function
GO:0004869 cysteine-type endopeptidase inhibitor activity GOslim:molecular_function
GO:0005681 spliceosomal complex GOslim:cellular_component
GO:0006464 cellular protein modification process GOslim:biological_process
GO:0006662 glycerol ether metabolic process GOslim:biological_process
GO:0015995 chlorophyll biosynthetic process GOslim:biological_process
GO:0034968 histone lysine methylation GOslim:biological_process
GO:0039694 viral RNA genome replication GOslim:biological_process
GO:0046406 magnesium protoporphyrin IX methyltransferase activity GOslim:molecular_function
map00780 Biotin metabolism
map03010 Ribosome
Transcription factor GRF Family Transcription factor GRF Family
Transcription factor Rcd1-like Family Transcription factor Rcd1-like Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.430
SRR2545915Juvenile tuber5.270
SRP108465SRR5643513five period of Gastrodia elata2.390
SRR5643514five period of Gastrodia elata2.610
SRR5643515five period of Gastrodia elata2.780
SRR5643524five period of Gastrodia elata2.300
SRR5643525five period of Gastrodia elata3.070
SRR5643528five period of Gastrodia elata3.620
SRR5643658five period of Gastrodia elata2.200
SRR5643659five period of Gastrodia elata6.240
SRR5643660five period of Gastrodia elata4.520
SRR5643661five period of Gastrodia elata6.480
SRR5643662five period of Gastrodia elata6.050
SRR5643663five period of Gastrodia elata5.630
SRR5643664five period of Gastrodia elata7.160
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.700
SRR6049655Rhizomagastrodiae_C368-T10_good_14.110
SRR6049656Rhizomagastrodiae_C368-T07_good_12.670
SRR6049657Rhizomagastrodiae_C368-T07_good_14.870
SRR6049658Rhizomagastrodiae_C368-T04_good_16.900
SRR6049659Rhizomagastrodiae_C368-T04_good_17.320
SRR6049660Rhizomagastrodiae_C368-T01_good_15.800
SRR6049661Rhizomagastrodiae_C368-T04_good_17.410
SRR6049662Rhizomagastrodiae_C368-T01_good_13.680
SRR6049663Rhizomagastrodiae_C368-T01_good_15.410
SRR6049664Rhizomagastrodiae_C368-T10_good_11.810
SRR6049665Rhizomagastrodiae_C368-T10_good_11.810
SRP279888GastroGastrodia elata tuber 12.02
JuvenJuvenile tuber4.47
Mother_GastroMother tuber of Gastrodia elata 7.81
Mother_JuvenMother tuber of Juvenile 4.35