Detail information of GWHGAAEX006158/evm.TU.scaffold_178.37


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG22664.00E-48Chromatin-associated protein Dek and related proteins, contains SAP DNA binding domain
nrgi|672133403|ref|XP_008790320.1|5.71E-108PREDICTED: DNA ligase 1-like [Phoenix dactylifera]
trEMBLtr|K7LAB8|K7LAB8_SOYBN6.00E-78Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G44130.4}
TAIRAT5G635504.00E-48DEK domain-containing chromatin associated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000197905918917468+
Transcript Sequence

Network for GWHGAAEX006158

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08766.10DEK_C97110245.50E-15
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms145.460
SRR2545915Juvenile tuber151.250
SRP108465SRR5643513five period of Gastrodia elata142.380
SRR5643514five period of Gastrodia elata132.630
SRR5643515five period of Gastrodia elata127.910
SRR5643524five period of Gastrodia elata129.960
SRR5643525five period of Gastrodia elata130.830
SRR5643528five period of Gastrodia elata114.490
SRR5643658five period of Gastrodia elata129.270
SRR5643659five period of Gastrodia elata126.600
SRR5643660five period of Gastrodia elata127.990
SRR5643661five period of Gastrodia elata118.120
SRR5643662five period of Gastrodia elata107.370
SRR5643663five period of Gastrodia elata117.260
SRR5643664five period of Gastrodia elata119.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1110.190
SRR6049655Rhizomagastrodiae_C368-T10_good_1103.640
SRR6049656Rhizomagastrodiae_C368-T07_good_1102.420
SRR6049657Rhizomagastrodiae_C368-T07_good_1125.620
SRR6049658Rhizomagastrodiae_C368-T04_good_1110.230
SRR6049659Rhizomagastrodiae_C368-T04_good_1135.150
SRR6049660Rhizomagastrodiae_C368-T01_good_1115.570
SRR6049661Rhizomagastrodiae_C368-T04_good_1117.360
SRR6049662Rhizomagastrodiae_C368-T01_good_192.670
SRR6049663Rhizomagastrodiae_C368-T01_good_1103.040
SRR6049664Rhizomagastrodiae_C368-T10_good_198.440
SRR6049665Rhizomagastrodiae_C368-T10_good_198.440
SRP279888GastroGastrodia elata tuber 78.04
JuvenJuvenile tuber114.73
Mother_GastroMother tuber of Gastrodia elata 74.71
Mother_JuvenMother tuber of Juvenile 101.70