Detail information of GWHGAAEX005159/evm.TU.scaffold_16.109


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17212.00E-34FOG: Zn-finger
nrgi|743826079|ref|XP_010933179.1|1.99E-42PREDICTED: zinc finger protein ZAT5-like [Elaeis guineensis]
Swissprottr|Q681X4|ZAT5_ARATH6.00E-35Zinc finger protein ZAT5
trEMBLtr|M0U769|M0U769_MUSAM7.00E-41Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_AchrUn_randomP07580_001}
TAIRAT2G282002.00E-34C2H2-type zinc finger family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000002432582343259483-
Transcript Sequence

Network for GWHGAAEX005159

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1GO:0003677 DNA binding GOslim:molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function
GO:0004857 enzyme inhibitor activity GOslim:molecular_function
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006629 lipid metabolic process GOslim:biological_process
GO:0008081 phosphoric diester hydrolase activity GOslim:molecular_function
GO:0008234 cysteine-type peptidase activity GOslim:molecular_function
GO:0009055 electron carrier activity GOslim:molecular_function
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function
GO:0015035 protein disulfide oxidoreductase activity GOslim:molecular_function
GO:0015267 channel activity GOslim:molecular_function
GO:0016020 membrane GOslim:cellular_component
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function
GO:0016757 transferase activity, transferring glycosyl groups GOslim:molecular_function
GO:0046556 alpha-L-arabinofuranosidase activity GOslim:molecular_function
GO:0046983 protein dimerization activity GOslim:molecular_function
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2C2-Dof Family Transcription factor C2C2-Dof Family
Transcription factor NAC Family Transcription factor NAC Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_643673.60E-11
PF13912.5zf-C2H2_6881126.60E-12
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.150
SRR2545915Juvenile tuber0.440
SRP108465SRR5643513five period of Gastrodia elata4.430
SRR5643514five period of Gastrodia elata1.120
SRR5643515five period of Gastrodia elata1.590
SRR5643524five period of Gastrodia elata0.280
SRR5643525five period of Gastrodia elata16.960
SRR5643528five period of Gastrodia elata10.320
SRR5643658five period of Gastrodia elata10.620
SRR5643659five period of Gastrodia elata0.780
SRR5643660five period of Gastrodia elata0.670
SRR5643661five period of Gastrodia elata0.490
SRR5643662five period of Gastrodia elata0.910
SRR5643663five period of Gastrodia elata0.560
SRR5643664five period of Gastrodia elata3.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.970
SRR6049655Rhizomagastrodiae_C368-T10_good_18.210
SRR6049656Rhizomagastrodiae_C368-T07_good_11.920
SRR6049657Rhizomagastrodiae_C368-T07_good_15.030
SRR6049658Rhizomagastrodiae_C368-T04_good_14.850
SRR6049659Rhizomagastrodiae_C368-T04_good_16.330
SRR6049660Rhizomagastrodiae_C368-T01_good_12.620
SRR6049661Rhizomagastrodiae_C368-T04_good_16.430
SRR6049662Rhizomagastrodiae_C368-T01_good_11.440
SRR6049663Rhizomagastrodiae_C368-T01_good_11.140
SRR6049664Rhizomagastrodiae_C368-T10_good_11.430
SRR6049665Rhizomagastrodiae_C368-T10_good_11.430
SRP279888GastroGastrodia elata tuber 2.77
JuvenJuvenile tuber0.47
Mother_GastroMother tuber of Gastrodia elata 3.78
Mother_JuvenMother tuber of Juvenile 0.78