Detail information of GWHGAAEX004906/evm.TU.scaffold_156.32


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG01671.00E-37FOG: Armadillo/beta-catenin-like repeats
nrgi|743818832|ref|XP_010931344.1|4.59E-50PREDICTED: U-box domain-containing protein 16-like [Elaeis guineensis]
Swissprottr|Q9LZW3|PUB16_ARATH4.00E-38U-box domain-containing protein 16
trEMBLtr|W9QXE8|W9QXE8_9ROSA8.00E-39U-box domain-containing protein 16 {ECO:0000313|EMBL:EXB42364.1}
TAIRAT5G018301.00E-37ARM repeat superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000016010438701050306+
Transcript Sequence

Network for GWHGAAEX004906

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module12AUX/IAA_EAR_family AUX/IAA_EAR_family
CYTOCHROME_P582_Family CYTOCHROME_P582_Family
GO:0004725 protein tyrosine phosphatase activity GOslim:molecular_function
GO:0008171 O-methyltransferase activity GOslim:molecular_function
GO:0009733 response to auxin GOslim:biological_process
GO:0010215 cellulose microfibril organization GOslim:biological_process
GO:0015079 potassium ion transmembrane transporter activity GOslim:molecular_function
GO:0031225 anchored component of membrane GOslim:cellular_component
GO:0071805 potassium ion transmembrane transport GOslim:biological_process
map02020 Two-component system
map04075 Plant hormone signal transduction
map04975 Fat digestion and absorption
Protein Kinases RLK-Pelle_WAK Family Protein Kinases RLK-Pelle_WAK Family
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2H2 Family Transcription factor C2H2 Family
Transcription factor SBP Family Transcription factor SBP Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016567Biological Processprotein ubiquitination
GO:0004842Molecular Functionubiquitin-protein transferase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.590
SRR2545915Juvenile tuber0.670
SRP108465SRR5643513five period of Gastrodia elata1.160
SRR5643514five period of Gastrodia elata0.950
SRR5643515five period of Gastrodia elata1.080
SRR5643524five period of Gastrodia elata0.870
SRR5643525five period of Gastrodia elata1.160
SRR5643528five period of Gastrodia elata2.030
SRR5643658five period of Gastrodia elata2.340
SRR5643659five period of Gastrodia elata1.200
SRR5643660five period of Gastrodia elata1.320
SRR5643661five period of Gastrodia elata1.240
SRR5643662five period of Gastrodia elata0.950
SRR5643663five period of Gastrodia elata0.580
SRR5643664five period of Gastrodia elata1.660
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.670
SRR6049655Rhizomagastrodiae_C368-T10_good_11.320
SRR6049656Rhizomagastrodiae_C368-T07_good_11.750
SRR6049657Rhizomagastrodiae_C368-T07_good_11.010
SRR6049658Rhizomagastrodiae_C368-T04_good_11.840
SRR6049659Rhizomagastrodiae_C368-T04_good_10.760
SRR6049660Rhizomagastrodiae_C368-T01_good_10.970
SRR6049661Rhizomagastrodiae_C368-T04_good_11.290
SRR6049662Rhizomagastrodiae_C368-T01_good_11.850
SRR6049663Rhizomagastrodiae_C368-T01_good_11.460
SRR6049664Rhizomagastrodiae_C368-T10_good_11.380
SRR6049665Rhizomagastrodiae_C368-T10_good_11.380
SRP279888GastroGastrodia elata tuber 1.14
JuvenJuvenile tuber1.51
Mother_GastroMother tuber of Gastrodia elata 4.43
Mother_JuvenMother tuber of Juvenile 3.90