Detail information of GWHGAAEX004666/evm.TU.scaffold_151.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|332291610|ref|YP_004430219.1|1.00E-11small GTP-binding protein [Krokinobacter sp. 4H-3-7-5]
KOGKOG03934.00E-119Ras-related small GTPase, Rho type
nrgi|514711676|ref|XP_004952335.1|3.30E-126PREDICTED: rac-like GTP-binding protein 7-like [Setaria italica]
Swissprottr|Q6Z7L8|RAC7_ORYSJ2.00E-128Rac-like GTP-binding protein 7 (Precursor)
trEMBLtr|K3YVV3|K3YVV3_SETIT1.00E-126Uncharacterized protein {ECO:0000313|EnsemblPlants:Si018399m}
TAIRAT5G459704.00E-119RAC-like 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000015512977281301493-
Transcript Sequence

Network for GWHGAAEX004666

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2C2H2_EAR_family C2H2_EAR_family
GO:0000786 nucleosome GOslim:cellular_component
GO:0003677 DNA binding GOslim:molecular_function
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0003993 acid phosphatase activity GOslim:molecular_function
GO:0004190 aspartic-type endopeptidase activity GOslim:molecular_function
GO:0004252 serine-type endopeptidase activity GOslim:molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function
GO:0004601 peroxidase activity GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor GOslim:molecular_function
GO:0004857 enzyme inhibitor activity GOslim:molecular_function
GO:0005384 manganese ion transmembrane transporter activity GOslim:molecular_function
GO:0005507 copper ion binding GOslim:molecular_function
GO:0005524 ATP binding GOslim:molecular_function
GO:0005576 extracellular region GOslim:cellular_component
GO:0005634 nucleus GOslim:cellular_component
GO:0005971 ribonucleoside-diphosphate reductase complex GOslim:cellular_component
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006270 DNA replication initiation GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0006508 proteolysis GOslim:biological_process
GO:0006979 response to oxidative stress GOslim:biological_process
GO:0008236 serine-type peptidase activity GOslim:molecular_function
GO:0008271 secondary active sulfate transmembrane transporter activity GOslim:molecular_function
GO:0008272 sulfate transport GOslim:biological_process
GO:0009055 electron carrier activity GOslim:molecular_function
GO:0010427 abscisic acid binding GOslim:molecular_function
GO:0015116 sulfate transmembrane transporter activity GOslim:molecular_function
GO:0015267 channel activity GOslim:molecular_function
GO:0015297 antiporter activity GOslim:molecular_function
GO:0016020 membrane GOslim:cellular_component
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016788 hydrolase activity, acting on ester bonds GOslim:molecular_function
GO:0016853 isomerase activity GOslim:molecular_function
GO:0016887 ATPase activity GOslim:molecular_function
GO:0020037 heme binding GOslim:molecular_function
GO:0030026 cellular manganese ion homeostasis GOslim:biological_process
GO:0030246 carbohydrate binding GOslim:molecular_function
GO:0038023 signaling receptor activity GOslim:molecular_function
GO:0042555 MCM complex GOslim:cellular_component
GO:0042626 ATPase activity, coupled to transmembrane movement of substances GOslim:molecular_function
GO:0042744 hydrogen peroxide catabolic process GOslim:biological_process
GO:0042910 xenobiotic transporter activity GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
GO:0046982 protein heterodimerization activity GOslim:molecular_function
GO:0048038 quinone binding GOslim:molecular_function
GO:0050660 flavin adenine dinucleotide binding GOslim:molecular_function
GO:0055085 transmembrane transport GOslim:biological_process
GO:0055114 oxidation-reduction process GOslim:biological_process
GO:0070008 serine-type exopeptidase activity GOslim:molecular_function
GO:0098599 palmitoyl hydrolase activity GOslim:molecular_function
map00062 Fatty acid elongation
map00904 Diterpenoid biosynthesis
map00940 Phenylpropanoid biosynthesis
map01100 Metabolic pathways
map01110 Biosynthesis of secondary metabolites
map02010 ABC transporters
map04614 Renin-angiotensin system
map04976 Bile secretion
Protein Kinases RLK-Pelle_LRR-III Family Protein Kinases RLK-Pelle_LRR-III Family
Protein Kinases RLK-Pelle_LRR-XIV Family Protein Kinases RLK-Pelle_LRR-XIV Family
Transcription factor AP2/ERF-AP2 Family Transcription factor AP2/ERF-AP2 Family
Transcription factor C2H2 Family Transcription factor C2H2 Family
Transcription factor GRAS Family Transcription factor GRAS Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00071.21Ras81774.60E-52
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K04392RAC1 Ras signaling pathway map04014
Rap1 signaling pathwaymap04015
MAPK signaling pathwaymap04010
MAPK signaling pathway - flymap04013
Wnt signaling pathwaymap04310
VEGF signaling pathwaymap04370
Sphingolipid signaling pathwaymap04071
cAMP signaling pathwaymap04024
PI3K-Akt signaling pathwaymap04151
Phagosomemap04145
Focal adhesionmap04510
Adherens junctionmap04520
Tight junctionmap04530
Regulation of actin cytoskeletonmap04810
Toll-like receptor signaling pathwaymap04620
Natural killer cell mediated cytotoxicitymap04650
B cell receptor signaling pathwaymap04662
Fc epsilon RI signaling pathwaymap04664
Fc gamma R-mediated phagocytosismap04666
Leukocyte transendothelial migrationmap04670
Chemokine signaling pathwaymap04062
Pancreatic secretionmap04972
Neurotrophin signaling pathwaymap04722
Axon guidancemap04360
Axon regenerationmap04361
Osteoclast differentiationmap04380

Gene Ontology

GO term OntologyName
GO:0007264Biological Processsmall GTPase mediated signal transduction
GO:0005525Molecular FunctionGTP binding
GO:0003924Molecular FunctionGTPase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.030
SRR2545915Juvenile tuber5.610
SRP108465SRR5643513five period of Gastrodia elata5.300
SRR5643514five period of Gastrodia elata7.120
SRR5643515five period of Gastrodia elata2.790
SRR5643524five period of Gastrodia elata3.790
SRR5643525five period of Gastrodia elata2.690
SRR5643528five period of Gastrodia elata1.520
SRR5643658five period of Gastrodia elata1.680
SRR5643659five period of Gastrodia elata3.090
SRR5643660five period of Gastrodia elata0.000
SRR5643661five period of Gastrodia elata0.090
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.140
SRR5643664five period of Gastrodia elata0.170
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_14.490
SRR6049655Rhizomagastrodiae_C368-T10_good_15.370
SRR6049656Rhizomagastrodiae_C368-T07_good_14.030
SRR6049657Rhizomagastrodiae_C368-T07_good_13.190
SRR6049658Rhizomagastrodiae_C368-T04_good_11.650
SRR6049659Rhizomagastrodiae_C368-T04_good_10.610
SRR6049660Rhizomagastrodiae_C368-T01_good_12.650
SRR6049661Rhizomagastrodiae_C368-T04_good_12.230
SRR6049662Rhizomagastrodiae_C368-T01_good_17.610
SRR6049663Rhizomagastrodiae_C368-T01_good_13.090
SRR6049664Rhizomagastrodiae_C368-T10_good_18.820
SRR6049665Rhizomagastrodiae_C368-T10_good_18.820
SRP279888GastroGastrodia elata tuber 0.09
JuvenJuvenile tuber0.57
Mother_GastroMother tuber of Gastrodia elata 0.57
Mother_JuvenMother tuber of Juvenile 0.41