Detail information of GWHGAAEX004479/evm.TU.scaffold_15.91


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|436833792|ref|YP_007319008.1|2.00E-11hypothetical protein FAES_0403 [Fibrella aestuarina BUZ 2]
nrgi|672112287|ref|XP_008804963.1|0PREDICTED: inactive receptor-like serine/threonine-protein kinase At2g40270 isoform X1 [Phoenix dactylifera]
Swissprottr|C0LGU7|Y5458_ARATH1.00E-151Probable LRR receptor-like serine/threonine-protein kinase At5g45840 (Precursor)
trEMBLtr|M0SWT2|M0SWT2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P08530_001}
TAIRAT5G458405.00E-151Leucine-rich repeat protein kinase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001916775691682494+
Transcript Sequence

Network for GWHGAAEX004479

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4AP2/ERF-ERF_EAR_family AP2/ERF-ERF_EAR_family
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016758 transferase activity, transferring hexosyl groups GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
map00561 Glycerolipid metabolism
map04923 Regulation of lipolysis in adipocytes
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor LOB Family Transcription factor LOB Family
Transcription factor MYB Family Transcription factor MYB Family
Transcription factor NAC Family Transcription factor NAC Family
Transcription factor Tify Family Transcription factor Tify Family
Transcription factor WRKY Family Transcription factor WRKY Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08263.11LRRNT_230702.20E-07
PF13855.5LRR_8981573.70E-09
PF07714.16Pkinase_Tyr3696152.40E-16
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_LRR-VI-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms25.260
SRR2545915Juvenile tuber22.710
SRP108465SRR5643513five period of Gastrodia elata26.480
SRR5643514five period of Gastrodia elata22.000
SRR5643515five period of Gastrodia elata33.440
SRR5643524five period of Gastrodia elata26.300
SRR5643525five period of Gastrodia elata55.150
SRR5643528five period of Gastrodia elata53.840
SRR5643658five period of Gastrodia elata56.030
SRR5643659five period of Gastrodia elata32.470
SRR5643660five period of Gastrodia elata24.410
SRR5643661five period of Gastrodia elata34.020
SRR5643662five period of Gastrodia elata30.690
SRR5643663five period of Gastrodia elata26.470
SRR5643664five period of Gastrodia elata36.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.980
SRR6049655Rhizomagastrodiae_C368-T10_good_134.900
SRR6049656Rhizomagastrodiae_C368-T07_good_132.450
SRR6049657Rhizomagastrodiae_C368-T07_good_130.620
SRR6049658Rhizomagastrodiae_C368-T04_good_130.800
SRR6049659Rhizomagastrodiae_C368-T04_good_134.290
SRR6049660Rhizomagastrodiae_C368-T01_good_139.520
SRR6049661Rhizomagastrodiae_C368-T04_good_130.920
SRR6049662Rhizomagastrodiae_C368-T01_good_131.550
SRR6049663Rhizomagastrodiae_C368-T01_good_145.510
SRR6049664Rhizomagastrodiae_C368-T10_good_131.100
SRR6049665Rhizomagastrodiae_C368-T10_good_131.100
SRP279888GastroGastrodia elata tuber 25.95
JuvenJuvenile tuber17.80
Mother_GastroMother tuber of Gastrodia elata 83.67
Mother_JuvenMother tuber of Juvenile 47.66