Detail information of GWHGAAEX003792/evm.TU.scaffold_14.91


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17211.00E-32FOG: Zn-finger
nrgi|672137877|ref|XP_008792675.1|1.66E-39PREDICTED: zinc finger protein ZAT10-like [Phoenix dactylifera]
Swissprottr|Q96289|ZAT10_ARATH4.00E-33Zinc finger protein ZAT10
trEMBLtr|V7CRT3|V7CRT3_PHAVU3.00E-36Uncharacterized protein {ECO:0000313|EMBL:ESW32897.1}
TAIRAT1G277301.00E-32salt tolerance zinc finger

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000001226269332627640-
Transcript Sequence

Network for GWHGAAEX003792

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_633571.20E-12
PF13912.5zf-C2H2_6861105.50E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.930
SRR2545915Juvenile tuber3.430
SRP108465SRR5643513five period of Gastrodia elata1.870
SRR5643514five period of Gastrodia elata2.610
SRR5643515five period of Gastrodia elata4.160
SRR5643524five period of Gastrodia elata0.470
SRR5643525five period of Gastrodia elata4.870
SRR5643528five period of Gastrodia elata1.460
SRR5643658five period of Gastrodia elata3.420
SRR5643659five period of Gastrodia elata4.920
SRR5643660five period of Gastrodia elata1.670
SRR5643661five period of Gastrodia elata2.730
SRR5643662five period of Gastrodia elata3.240
SRR5643663five period of Gastrodia elata2.450
SRR5643664five period of Gastrodia elata3.930
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.570
SRR6049655Rhizomagastrodiae_C368-T10_good_15.440
SRR6049656Rhizomagastrodiae_C368-T07_good_13.950
SRR6049657Rhizomagastrodiae_C368-T07_good_12.250
SRR6049658Rhizomagastrodiae_C368-T04_good_12.200
SRR6049659Rhizomagastrodiae_C368-T04_good_12.740
SRR6049660Rhizomagastrodiae_C368-T01_good_12.490
SRR6049661Rhizomagastrodiae_C368-T04_good_13.760
SRR6049662Rhizomagastrodiae_C368-T01_good_14.600
SRR6049663Rhizomagastrodiae_C368-T01_good_14.220
SRR6049664Rhizomagastrodiae_C368-T10_good_18.800
SRR6049665Rhizomagastrodiae_C368-T10_good_18.800
SRP279888GastroGastrodia elata tuber 0.76
JuvenJuvenile tuber0.16
Mother_GastroMother tuber of Gastrodia elata 2.37
Mother_JuvenMother tuber of Juvenile 1.48