Detail information of GWHGAAEX003684/evm.TU.scaffold_139.102


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31267.00E-102Porin/voltage-dependent anion-selective channel protein
nrgi|695050327|ref|XP_009413143.1|1.03E-138PREDICTED: mitochondrial outer membrane protein porin 6 [Musa acuminata subsp. malaccensis]
Swissprottr|Q10S27|VDAC6_ORYSJ1.00E-127Mitochondrial outer membrane protein porin 6
trEMBLtr|M0TQC3|M0TQC3_MUSAM7.00E-127Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P14200_001}
TAIRAT5G574907.00E-102voltage dependent anion channel 4

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000013519091721949532+
Transcript Sequence

Network for GWHGAAEX003684

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01459.21Porin_352588.00E-54
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15040VDAC2 Calcium signaling pathway map04020
cGMP-PKG signaling pathwaymap04022
Ferroptosismap04216
Necroptosismap04217
Cellular senescencemap04218
NOD-like receptor signaling pathwaymap04621
Cholesterol metabolismmap04979

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0005741Cellular Componentmitochondrial outer membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms47.140
SRR2545915Juvenile tuber47.410
SRP108465SRR5643513five period of Gastrodia elata32.000
SRR5643514five period of Gastrodia elata35.500
SRR5643515five period of Gastrodia elata31.410
SRR5643524five period of Gastrodia elata34.400
SRR5643525five period of Gastrodia elata23.430
SRR5643528five period of Gastrodia elata31.320
SRR5643658five period of Gastrodia elata22.060
SRR5643659five period of Gastrodia elata25.110
SRR5643660five period of Gastrodia elata29.600
SRR5643661five period of Gastrodia elata27.860
SRR5643662five period of Gastrodia elata26.610
SRR5643663five period of Gastrodia elata19.640
SRR5643664five period of Gastrodia elata23.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.170
SRR6049655Rhizomagastrodiae_C368-T10_good_144.470
SRR6049656Rhizomagastrodiae_C368-T07_good_141.200
SRR6049657Rhizomagastrodiae_C368-T07_good_141.050
SRR6049658Rhizomagastrodiae_C368-T04_good_144.550
SRR6049659Rhizomagastrodiae_C368-T04_good_145.980
SRR6049660Rhizomagastrodiae_C368-T01_good_149.690
SRR6049661Rhizomagastrodiae_C368-T04_good_142.950
SRR6049662Rhizomagastrodiae_C368-T01_good_140.180
SRR6049663Rhizomagastrodiae_C368-T01_good_145.090
SRR6049664Rhizomagastrodiae_C368-T10_good_142.810
SRR6049665Rhizomagastrodiae_C368-T10_good_142.810
SRP279888GastroGastrodia elata tuber 45.08
JuvenJuvenile tuber34.72
Mother_GastroMother tuber of Gastrodia elata 23.87
Mother_JuvenMother tuber of Juvenile 28.86