Detail information of GWHGAAEX003561/evm.TU.scaffold_138.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|410661797|ref|YP_006914168.1|1.00E-20Serine/threonine protein kinase PrkC, regulator of stationary phase [Dehalobacter sp. CF]
KOGKOG11870Serine/threonine protein kinase
nrgi|695037378|ref|XP_009406179.1|0PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Musa acuminata subsp. malaccensis]
Swissprottr|Q9CAL8|PEK13_ARATH3.00E-97Proline-rich receptor-like protein kinase PERK13
trEMBLtr|F6HY31|F6HY31_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB59354.1}
TAIRAT3G136900Protein kinase protein with adenine nucleotide alpha hydrolases-like domain

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000014312613221277277+
Transcript Sequence

Network for GWHGAAEX003561

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07714.16Pkinase_Tyr4106751.10E-40
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyRLK-Pelle_PERK-2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468Biological Processprotein phosphorylation
GO:0005524Molecular FunctionATP binding
GO:0004672Molecular Functionprotein kinase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.030
SRR2545915Juvenile tuber11.250
SRP108465SRR5643513five period of Gastrodia elata15.360
SRR5643514five period of Gastrodia elata12.580
SRR5643515five period of Gastrodia elata10.570
SRR5643524five period of Gastrodia elata13.260
SRR5643525five period of Gastrodia elata5.900
SRR5643528five period of Gastrodia elata7.770
SRR5643658five period of Gastrodia elata14.590
SRR5643659five period of Gastrodia elata4.610
SRR5643660five period of Gastrodia elata6.320
SRR5643661five period of Gastrodia elata5.210
SRR5643662five period of Gastrodia elata5.970
SRR5643663five period of Gastrodia elata2.980
SRR5643664five period of Gastrodia elata4.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.920
SRR6049655Rhizomagastrodiae_C368-T10_good_111.760
SRR6049656Rhizomagastrodiae_C368-T07_good_113.420
SRR6049657Rhizomagastrodiae_C368-T07_good_112.260
SRR6049658Rhizomagastrodiae_C368-T04_good_19.990
SRR6049659Rhizomagastrodiae_C368-T04_good_17.960
SRR6049660Rhizomagastrodiae_C368-T01_good_111.100
SRR6049661Rhizomagastrodiae_C368-T04_good_112.430
SRR6049662Rhizomagastrodiae_C368-T01_good_112.490
SRR6049663Rhizomagastrodiae_C368-T01_good_110.790
SRR6049664Rhizomagastrodiae_C368-T10_good_112.360
SRR6049665Rhizomagastrodiae_C368-T10_good_112.360
SRP279888GastroGastrodia elata tuber 6.10
JuvenJuvenile tuber23.25
Mother_GastroMother tuber of Gastrodia elata 10.66
Mother_JuvenMother tuber of Juvenile 11.13