Detail information of GWHGAAEX003183/evm.TU.scaffold_130.38


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17213.00E-24FOG: Zn-finger
nrgi|670439440|ref|XP_008660091.1|1.23E-30PREDICTED: zinc finger protein ZAT6-like [Zea mays]
Swissprottr|O22533|ZAT6_ARATH5.00E-23Zinc finger protein ZAT6
trEMBLtr|K7VL82|K7VL82_MAIZE5.00E-31Uncharacterized protein {ECO:0000313|EMBL:AFW88163.1, ECO:0000313|EnsemblPlants:GRMZM2G113860_P01}
TAIRAT3G499303.00E-24C2H2 and C2HC zinc fingers superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000129880428881117-
Transcript Sequence

Network for GWHGAAEX003183

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4AP2/ERF-ERF_EAR_family AP2/ERF-ERF_EAR_family
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016758 transferase activity, transferring hexosyl groups GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
map00561 Glycerolipid metabolism
map04923 Regulation of lipolysis in adipocytes
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor LOB Family Transcription factor LOB Family
Transcription factor MYB Family Transcription factor MYB Family
Transcription factor NAC Family Transcription factor NAC Family
Transcription factor Tify Family Transcription factor Tify Family
Transcription factor WRKY Family Transcription factor WRKY Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_637623.50E-13
PF13912.5zf-C2H2_6831062.00E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.220
SRR2545915Juvenile tuber3.240
SRP108465SRR5643513five period of Gastrodia elata2.700
SRR5643514five period of Gastrodia elata1.690
SRR5643515five period of Gastrodia elata34.570
SRR5643524five period of Gastrodia elata6.140
SRR5643525five period of Gastrodia elata6.620
SRR5643528five period of Gastrodia elata149.800
SRR5643658five period of Gastrodia elata14.660
SRR5643659five period of Gastrodia elata19.200
SRR5643660five period of Gastrodia elata1.330
SRR5643661five period of Gastrodia elata4.860
SRR5643662five period of Gastrodia elata11.160
SRR5643663five period of Gastrodia elata4.890
SRR5643664five period of Gastrodia elata7.680
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.680
SRR6049655Rhizomagastrodiae_C368-T10_good_10.000
SRR6049656Rhizomagastrodiae_C368-T07_good_10.710
SRR6049657Rhizomagastrodiae_C368-T07_good_12.030
SRR6049658Rhizomagastrodiae_C368-T04_good_14.720
SRR6049659Rhizomagastrodiae_C368-T04_good_13.650
SRR6049660Rhizomagastrodiae_C368-T01_good_15.800
SRR6049661Rhizomagastrodiae_C368-T04_good_13.050
SRR6049662Rhizomagastrodiae_C368-T01_good_14.480
SRR6049663Rhizomagastrodiae_C368-T01_good_19.880
SRR6049664Rhizomagastrodiae_C368-T10_good_16.200
SRR6049665Rhizomagastrodiae_C368-T10_good_16.200
SRP279888GastroGastrodia elata tuber 1.37
JuvenJuvenile tuber0.13
Mother_GastroMother tuber of Gastrodia elata 249.92
Mother_JuvenMother tuber of Juvenile 50.80