Gene detail

Detail information of GWHGAAEX003145/evm.TU.scaffold_13.193

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743805331\|ref\|XP_010927412.1\|	1.71E-124	PREDICTED: uncharacterized protein LOC105049460 [Elaeis guineensis]
trEMBL	tr\|M0SUP1\|M0SUP1_MUSAM	4.00E-124	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr5P01120_001}
TAIR	AT1G47860_1	3.00E-89	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000007	9872869	9895805	-

Transcript Sequence
>GWHTAAEX003145 GCAAGATCAAACAAACCCTGAGCCTTTCTTTACTCGACACTTCAACGCTTAACAGGCCATAGGGCTCTACTTTCTTAGATCTGCTCAAATTCAGCACCCATTTTCATTTCTTTCTTAAACAAAGACTGCACAACGAACAACAACAGTAAAATTATGGGAGCTCAGGAGGACTCTATGGTATTTGTACTCAGTATTTCCGACCTTATTTTAATCTTCACTCTAACAACTTTAATCTTATAAAGCAACGGAAACACATCTCACAAAGGTAAAGAGCATCATTCATCCCCTCTGAGAAACAAAAAAACTAATAAGAAAAAAGAAAAAAAGAAAAAGAGTTCACCTCTGCCGAATGGCCGGAGCCAGAAGAGGCAGAGAGAAGAAGACTAGGAAGCATTCAGATGAGAAAGAAGGGCCCAGGGGAGAGGAAACTGCTGCTCCAAGAAGGTCTTTGACCAACTTCTTCCCCAGCAGGCATCACTATGTAGTAACAGCGGGAAGAAAATGGTGCTCTGTCTCTCTGTGCAAGCAGAGAGAGAGCACCTCCAAATCCTCGCCTCAGAGATGCCTGAAGCCTGGCAATGAGGGGGCAATTCCTTCGTCTGCTTCGGCCTCTGCTTCTTTCTCTTCTTCATCAGGGGGTTCTTTCAGAGGAATGCATCTGAGTAAGCTTTCAGGGTGCTACGAGTGCCACATGGCTGCTGATCCAATCAGCAGCATTCTCAGAGATTTCGCCCTCTCCTGCCCAGATTGCGGGCAGGTCTTTATGAAATCGGACAGTTTGGAGCTGCACCAAACGGCCAGGCATGCAGTGTCAGAATTGGGCCCCGAAGACAGCAGCAGAAACATAGTGGAAATCATATTCCACTCTAGTTGGGCGAAGAAGCAAGCATTGCCATGCCGGATTGAGAGAATCCTGAAGATCAGGAGCTCTAGCAAGACCATAGCTAGATTCGAGGAGTACAGAAACTCCATCAAGAGCAAAGCCAGCAAACTTCCGAAGAAGAATCCGCGGTGCATTGCCGACGGAAACGAGCTCCTGAGATTCTACTGCGCTTCCCTCAGCTGCTCCCTGGGCCTCAACGGCTCCACCAATCTGTGCACAGAGGCGCCTAAGTGCAGAATTTGCGGCATCATTAGAGACGGCGTCAAGGCGGACGCTCTCGGGAGGATCAGGACGACGGGCGCGAGCGGGAGGGCGCACGACATGGCTCAGATTTCGCACGAGAATGAGAGGAGGGGGATGCTTGTTTGTAGGGTGATCGCAGGGAGAGTGAAGAGGGGGCAGGATGCTTCCGAGGACTTCGATTCGGTGGTCGGCGGGCTTGGAATGTATTCAAGTATGGATGAGATTTTTGTGTTCAATCCTAGAGCAATACTTCCTTGCTTTGTTGTTATCTACACTGCCTTTTAGTTCGAGGGGAAGGATGCGGCTGTCTTTCTTTTTCTTTCTACATAGACTCTTTTTCTTTATACTCTATGTTATGTTATTGCTCAAAAGTATCTTGATTTTAGGAGTCTTAAATATGAATATGTAGTTCAAAATATTTGTATACATGTTTTT

Network for GWHGAAEX003145

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module7	GO:0005506 iron ion binding GOslim:molecular_function GO:0005576 extracellular region GOslim:cellular_component GO:0010333 terpene synthase activity GOslim:molecular_function GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GOslim:molecular_function GO:0016829 lyase activity GOslim:molecular_function GO:0020037 heme binding GOslim:molecular_function GO:0055114 oxidation-reduction process GOslim:biological_process map00906 Carotenoid biosynthesis map00908 Zeatin biosynthesis map01110 Biosynthesis of secondary metabolites map02010 ABC transporters map04976 Bile secretion Transcription factor AP2/ERF-AP2 Family Transcription factor AP2/ERF-AP2 Family

Module ID

Function Annotation

Module7

GO:0005506 iron ion binding GOslim:molecular_function
GO:0005576 extracellular region GOslim:cellular_component
GO:0010333 terpene synthase activity GOslim:molecular_function
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GOslim:molecular_function
GO:0016829 lyase activity GOslim:molecular_function
GO:0020037 heme binding GOslim:molecular_function
GO:0055114 oxidation-reduction process GOslim:biological_process
map00906 Carotenoid biosynthesis
map00908 Zeatin biosynthesis
map01110 Biosynthesis of secondary metabolites
map02010 ABC transporters
map04976 Bile secretion
Transcription factor AP2/ERF-AP2 Family Transcription factor AP2/ERF-AP2 Family

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	C2H2

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0003676	Molecular Function	nucleic acid binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	2.880
SRP064423	SRR2545915	Juvenile tuber	11.020
SRP108465	SRR5643513	five period of Gastrodia elata	11.190
	SRR5643514	five period of Gastrodia elata	12.110
	SRR5643515	five period of Gastrodia elata	7.460
	SRR5643524	five period of Gastrodia elata	9.670
	SRR5643525	five period of Gastrodia elata	3.890
	SRR5643528	five period of Gastrodia elata	2.740
	SRR5643658	five period of Gastrodia elata	3.500
	SRR5643659	five period of Gastrodia elata	22.120
	SRR5643660	five period of Gastrodia elata	16.960
	SRR5643661	five period of Gastrodia elata	12.810
	SRR5643662	five period of Gastrodia elata	3.820
	SRR5643663	five period of Gastrodia elata	6.170
	SRR5643664	five period of Gastrodia elata	2.210
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	17.040
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	9.520
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	20.680
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	14.720
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	11.350
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	8.110
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	18.150
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	12.530
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	16.840
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	14.450
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	13.870
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	13.870
SRP279888	Gastro	Gastrodia elata tuber	3.59
	Juven	Juvenile tuber	36.56
	Mother_Gastro	Mother tuber of Gastrodia elata	1.72
	Mother_Juven	Mother tuber of Juvenile	5.09