Detail information of GWHGAAEX003145/evm.TU.scaffold_13.193


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743805331|ref|XP_010927412.1|1.71E-124PREDICTED: uncharacterized protein LOC105049460 [Elaeis guineensis]
trEMBLtr|M0SUP1|M0SUP1_MUSAM4.00E-124Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P01120_001}
TAIRAT1G47860_13.00E-89Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000798728699895805-
Transcript Sequence

Network for GWHGAAEX003145

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7GO:0005506 iron ion binding GOslim:molecular_function
GO:0005576 extracellular region GOslim:cellular_component
GO:0010333 terpene synthase activity GOslim:molecular_function
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GOslim:molecular_function
GO:0016829 lyase activity GOslim:molecular_function
GO:0020037 heme binding GOslim:molecular_function
GO:0055114 oxidation-reduction process GOslim:biological_process
map00906 Carotenoid biosynthesis
map00908 Zeatin biosynthesis
map01110 Biosynthesis of secondary metabolites
map02010 ABC transporters
map04976 Bile secretion
Transcription factor AP2/ERF-AP2 Family Transcription factor AP2/ERF-AP2 Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms2.880
SRR2545915Juvenile tuber11.020
SRP108465SRR5643513five period of Gastrodia elata11.190
SRR5643514five period of Gastrodia elata12.110
SRR5643515five period of Gastrodia elata7.460
SRR5643524five period of Gastrodia elata9.670
SRR5643525five period of Gastrodia elata3.890
SRR5643528five period of Gastrodia elata2.740
SRR5643658five period of Gastrodia elata3.500
SRR5643659five period of Gastrodia elata22.120
SRR5643660five period of Gastrodia elata16.960
SRR5643661five period of Gastrodia elata12.810
SRR5643662five period of Gastrodia elata3.820
SRR5643663five period of Gastrodia elata6.170
SRR5643664five period of Gastrodia elata2.210
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.040
SRR6049655Rhizomagastrodiae_C368-T10_good_19.520
SRR6049656Rhizomagastrodiae_C368-T07_good_120.680
SRR6049657Rhizomagastrodiae_C368-T07_good_114.720
SRR6049658Rhizomagastrodiae_C368-T04_good_111.350
SRR6049659Rhizomagastrodiae_C368-T04_good_18.110
SRR6049660Rhizomagastrodiae_C368-T01_good_118.150
SRR6049661Rhizomagastrodiae_C368-T04_good_112.530
SRR6049662Rhizomagastrodiae_C368-T01_good_116.840
SRR6049663Rhizomagastrodiae_C368-T01_good_114.450
SRR6049664Rhizomagastrodiae_C368-T10_good_113.870
SRR6049665Rhizomagastrodiae_C368-T10_good_113.870
SRP279888GastroGastrodia elata tuber 3.59
JuvenJuvenile tuber36.56
Mother_GastroMother tuber of Gastrodia elata 1.72
Mother_JuvenMother tuber of Juvenile 5.09