Detail information of GWHGAAEX002483/evm.TU.scaffold_12.268


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|254786725|ref|YP_003074154.1|1.00E-14thioredoxin [Teredinibacter turnerae T7901]
KOGKOG09071.00E-40Thioredoxin
nrgi|743820686|ref|XP_010931846.1|1.10E-49PREDICTED: thioredoxin-like protein CXXS1 [Elaeis guineensis]
Swissprottr|Q0J9V5|CXXS1_ORYSJ1.00E-42Thioredoxin-like protein CXXS1
trEMBLtr|M0U4S1|M0U4S1_MUSAM2.00E-48Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P30140_001}
TAIRAT1G115301.00E-40C-terminal cysteine residue is changed to a serine 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX000000091012692010129763+
Transcript Sequence

Network for GWHGAAEX002483

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module11CYTOCHROME_P498_Family CYTOCHROME_P498_Family
CYTOCHROME_P526_Family CYTOCHROME_P526_Family
GO:0000387 spliceosomal snRNP assembly GOslim:biological_process
GO:0003968 RNA-directed RNA polymerase activity GOslim:molecular_function
GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity GOslim:molecular_function
GO:0004869 cysteine-type endopeptidase inhibitor activity GOslim:molecular_function
GO:0005681 spliceosomal complex GOslim:cellular_component
GO:0006464 cellular protein modification process GOslim:biological_process
GO:0006662 glycerol ether metabolic process GOslim:biological_process
GO:0015995 chlorophyll biosynthetic process GOslim:biological_process
GO:0034968 histone lysine methylation GOslim:biological_process
GO:0039694 viral RNA genome replication GOslim:biological_process
GO:0046406 magnesium protoporphyrin IX methyltransferase activity GOslim:molecular_function
map00780 Biotin metabolism
map03010 Ribosome
Transcription factor GRF Family Transcription factor GRF Family
Transcription factor Rcd1-like Family Transcription factor Rcd1-like Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00085.19Thioredoxin171132.40E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03671trxA NOD-like receptor signaling pathway map04621

Gene Ontology

GO term OntologyName
GO:0006662Biological Processglycerol ether metabolic process
GO:0045454Biological Processcell redox homeostasis
GO:0015035Molecular Functionprotein disulfide oxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms319.530
SRR2545915Juvenile tuber345.050
SRP108465SRR5643513five period of Gastrodia elata173.200
SRR5643514five period of Gastrodia elata137.560
SRR5643515five period of Gastrodia elata152.110
SRR5643524five period of Gastrodia elata128.050
SRR5643525five period of Gastrodia elata476.520
SRR5643528five period of Gastrodia elata255.190
SRR5643658five period of Gastrodia elata438.510
SRR5643659five period of Gastrodia elata329.910
SRR5643660five period of Gastrodia elata386.840
SRR5643661five period of Gastrodia elata334.830
SRR5643662five period of Gastrodia elata363.690
SRR5643663five period of Gastrodia elata375.640
SRR5643664five period of Gastrodia elata406.720
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1201.370
SRR6049655Rhizomagastrodiae_C368-T10_good_1111.620
SRR6049656Rhizomagastrodiae_C368-T07_good_1155.400
SRR6049657Rhizomagastrodiae_C368-T07_good_1223.710
SRR6049658Rhizomagastrodiae_C368-T04_good_1232.700
SRR6049659Rhizomagastrodiae_C368-T04_good_1256.940
SRR6049660Rhizomagastrodiae_C368-T01_good_1170.860
SRR6049661Rhizomagastrodiae_C368-T04_good_1227.440
SRR6049662Rhizomagastrodiae_C368-T01_good_179.770
SRR6049663Rhizomagastrodiae_C368-T01_good_1112.490
SRR6049664Rhizomagastrodiae_C368-T10_good_1118.540
SRR6049665Rhizomagastrodiae_C368-T10_good_1118.540
SRP279888GastroGastrodia elata tuber 770.03
JuvenJuvenile tuber348.74
Mother_GastroMother tuber of Gastrodia elata 246.77
Mother_JuvenMother tuber of Juvenile 314.25