Detail information of GWHGAAEX002364/evm.TU.scaffold_12.121


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG17219.00E-20FOG: Zn-finger
nrgi|672114311|ref|XP_008776407.1|7.76E-24PREDICTED: zinc finger protein ZAT11-like [Phoenix dactylifera]
Swissprottr|Q9SLD4|ZAT11_ARATH3.00E-20Zinc finger protein ZAT11
trEMBLtr|Q2HU63|Q2HU63_MEDTR3.00E-23Zinc finger, C2H2-type {ECO:0000313|EMBL:ABD32282.1}
TAIRAT2G374309.00E-20C2H2 and C2HC zinc fingers superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000954891235490444+
Transcript Sequence

Network for GWHGAAEX002364

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module13CYTOCHROME_P451_Family CYTOCHROME_P451_Family
CYTOCHROME_P504_Family CYTOCHROME_P504_Family
Glycoside Hydrolases 81 Glycoside Hydrolases 81
GO:0003677 DNA binding GOslim:molecular_function
GO:0003680 AT DNA binding GOslim:molecular_function
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0003872 6-phosphofructokinase activity GOslim:molecular_function
GO:0004385 guanylate kinase activity GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0004842 ubiquitin-protein transferase activity GOslim:molecular_function
GO:0005509 calcium ion binding GOslim:molecular_function
GO:0006002 fructose 6-phosphate metabolic process GOslim:biological_process
GO:0006163 purine nucleotide metabolic process GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0006839 mitochondrial transport GOslim:biological_process
GO:0009733 response to auxin GOslim:biological_process
GO:0016567 protein ubiquitination GOslim:biological_process
GO:0030247 polysaccharide binding GOslim:molecular_function
GO:0030599 pectinesterase activity GOslim:molecular_function
GO:0031966 mitochondrial membrane GOslim:cellular_component
GO:0042545 cell wall modification GOslim:biological_process
GO:0043169 cation binding GOslim:molecular_function
map04016 MAPK signaling pathway - plant
map04075 Plant hormone signal transduction
map04626 Plant-pathogen interaction
MYB_EAR_family MYB_EAR_family
Protein Kinases RLK-Pelle_CrRLK1L-1 Family Protein Kinases RLK-Pelle_CrRLK1L-1 Family
Protein Kinases RLK-Pelle_LRR-XII-1 Family Protein Kinases RLK-Pelle_LRR-XII-1 Family
Protein Kinases RLK-Pelle_WAK_LRK10L-1 Family Protein Kinases RLK-Pelle_WAK_LRK10L-1 Family
Protein Kinases STE_STE7 Family Protein Kinases STE_STE7 Family
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor bHLH Family Transcription factor bHLH Family
Ubiquitin_E3 RING_U-box_family Ubiquitin_E3 RING_U-box_family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13912.5zf-C2H2_612344.70E-10
PF13912.5zf-C2H2_650744.50E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.810
SRR2545915Juvenile tuber7.290
SRP108465SRR5643513five period of Gastrodia elata25.600
SRR5643514five period of Gastrodia elata8.090
SRR5643515five period of Gastrodia elata65.520
SRR5643524five period of Gastrodia elata8.540
SRR5643525five period of Gastrodia elata189.500
SRR5643528five period of Gastrodia elata80.180
SRR5643658five period of Gastrodia elata77.380
SRR5643659five period of Gastrodia elata37.880
SRR5643660five period of Gastrodia elata4.250
SRR5643661five period of Gastrodia elata6.520
SRR5643662five period of Gastrodia elata31.820
SRR5643663five period of Gastrodia elata16.490
SRR5643664five period of Gastrodia elata189.580
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_129.600
SRR6049655Rhizomagastrodiae_C368-T10_good_120.750
SRR6049656Rhizomagastrodiae_C368-T07_good_117.400
SRR6049657Rhizomagastrodiae_C368-T07_good_124.310
SRR6049658Rhizomagastrodiae_C368-T04_good_127.740
SRR6049659Rhizomagastrodiae_C368-T04_good_123.270
SRR6049660Rhizomagastrodiae_C368-T01_good_184.190
SRR6049661Rhizomagastrodiae_C368-T04_good_137.450
SRR6049662Rhizomagastrodiae_C368-T01_good_113.520
SRR6049663Rhizomagastrodiae_C368-T01_good_147.330
SRR6049664Rhizomagastrodiae_C368-T10_good_123.090
SRR6049665Rhizomagastrodiae_C368-T10_good_123.090
SRP279888GastroGastrodia elata tuber 8.69
JuvenJuvenile tuber0.80
Mother_GastroMother tuber of Gastrodia elata 74.76
Mother_JuvenMother tuber of Juvenile 27.91