Detail information of GWHGAAEX002330/evm.TU.scaffold_12.62


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743766059|ref|XP_010913257.1|4.47E-86PREDICTED: uncharacterized protein LOC105038998 [Elaeis guineensis]
trEMBLtr|M0SVJ5|M0SVJ5_MUSAM4.00E-80Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P04160_001}
TAIRAT5G562502.00E-34hapless 8

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000000925058002510590+
Transcript Sequence

Network for GWHGAAEX002330

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4AP2/ERF-ERF_EAR_family AP2/ERF-ERF_EAR_family
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016758 transferase activity, transferring hexosyl groups GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
map00561 Glycerolipid metabolism
map04923 Regulation of lipolysis in adipocytes
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor LOB Family Transcription factor LOB Family
Transcription factor MYB Family Transcription factor MYB Family
Transcription factor NAC Family Transcription factor NAC Family
Transcription factor Tify Family Transcription factor Tify Family
Transcription factor WRKY Family Transcription factor WRKY Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms50.620
SRR2545915Juvenile tuber43.560
SRP108465SRR5643513five period of Gastrodia elata31.270
SRR5643514five period of Gastrodia elata30.450
SRR5643515five period of Gastrodia elata31.330
SRR5643524five period of Gastrodia elata32.910
SRR5643525five period of Gastrodia elata83.340
SRR5643528five period of Gastrodia elata78.010
SRR5643658five period of Gastrodia elata71.780
SRR5643659five period of Gastrodia elata23.360
SRR5643660five period of Gastrodia elata26.770
SRR5643661five period of Gastrodia elata24.340
SRR5643662five period of Gastrodia elata28.650
SRR5643663five period of Gastrodia elata25.910
SRR5643664five period of Gastrodia elata28.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.850
SRR6049655Rhizomagastrodiae_C368-T10_good_139.480
SRR6049656Rhizomagastrodiae_C368-T07_good_126.360
SRR6049657Rhizomagastrodiae_C368-T07_good_132.360
SRR6049658Rhizomagastrodiae_C368-T04_good_134.500
SRR6049659Rhizomagastrodiae_C368-T04_good_140.750
SRR6049660Rhizomagastrodiae_C368-T01_good_133.410
SRR6049661Rhizomagastrodiae_C368-T04_good_138.400
SRR6049662Rhizomagastrodiae_C368-T01_good_131.360
SRR6049663Rhizomagastrodiae_C368-T01_good_133.460
SRR6049664Rhizomagastrodiae_C368-T10_good_124.090
SRR6049665Rhizomagastrodiae_C368-T10_good_124.090
SRP279888GastroGastrodia elata tuber 29.68
JuvenJuvenile tuber30.17
Mother_GastroMother tuber of Gastrodia elata 98.83
Mother_JuvenMother tuber of Juvenile 94.37