Detail information of GWHGAAEX002125/evm.TU.scaffold_116.9


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG13569.00E-167Putative transcription factor 5qNCA, contains JmjC domain
nrgi|359489580|ref|XP_002263925.2|0PREDICTED: lysine-specific demethylase JMJ25 [Vitis vinifera]
Swissprottr|Q9SSE9|JMJ25_ARATH8.00E-81Lysine-specific demethylase JMJ25
trEMBLtr|F6I6E8|F6I6E8_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB62544.1}
TAIRAT4G009909.00E-167Transcription factor jumonji (jmjC) domain-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000112585223628388-
Transcript Sequence

Network for GWHGAAEX002125

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module7GO:0005506 iron ion binding GOslim:molecular_function
GO:0005576 extracellular region GOslim:cellular_component
GO:0010333 terpene synthase activity GOslim:molecular_function
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GOslim:molecular_function
GO:0016829 lyase activity GOslim:molecular_function
GO:0020037 heme binding GOslim:molecular_function
GO:0055114 oxidation-reduction process GOslim:biological_process
map00906 Carotenoid biosynthesis
map00908 Zeatin biosynthesis
map01110 Biosynthesis of secondary metabolites
map02010 ABC transporters
map04976 Bile secretion
Transcription factor AP2/ERF-AP2 Family Transcription factor AP2/ERF-AP2 Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10497.8zf-4CXXC_R12112722.70E-06
PF02373.21JmjC93310291.30E-13
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyJumonji

KEGG pathway

KO Enzyme pathway mapID
K15601KDM3 Thermogenesis map04714

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.900
SRR2545915Juvenile tuber36.240
SRP108465SRR5643513five period of Gastrodia elata29.250
SRR5643514five period of Gastrodia elata28.100
SRR5643515five period of Gastrodia elata27.280
SRR5643524five period of Gastrodia elata31.540
SRR5643525five period of Gastrodia elata23.780
SRR5643528five period of Gastrodia elata26.330
SRR5643658five period of Gastrodia elata24.420
SRR5643659five period of Gastrodia elata22.510
SRR5643660five period of Gastrodia elata21.750
SRR5643661five period of Gastrodia elata21.540
SRR5643662five period of Gastrodia elata21.280
SRR5643663five period of Gastrodia elata22.040
SRR5643664five period of Gastrodia elata23.000
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_126.660
SRR6049655Rhizomagastrodiae_C368-T10_good_121.460
SRR6049656Rhizomagastrodiae_C368-T07_good_130.120
SRR6049657Rhizomagastrodiae_C368-T07_good_125.200
SRR6049658Rhizomagastrodiae_C368-T04_good_126.440
SRR6049659Rhizomagastrodiae_C368-T04_good_130.830
SRR6049660Rhizomagastrodiae_C368-T01_good_129.690
SRR6049661Rhizomagastrodiae_C368-T04_good_128.160
SRR6049662Rhizomagastrodiae_C368-T01_good_132.610
SRR6049663Rhizomagastrodiae_C368-T01_good_133.430
SRR6049664Rhizomagastrodiae_C368-T10_good_125.030
SRR6049665Rhizomagastrodiae_C368-T10_good_125.030
SRP279888GastroGastrodia elata tuber 25.84
JuvenJuvenile tuber81.47
Mother_GastroMother tuber of Gastrodia elata 47.92
Mother_JuvenMother tuber of Juvenile 65.11