Detail information of GWHGAAEX001749/evm.TU.scaffold_112.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31831.00E-71Predicted Zn-finger protein
nrgi|672123035|ref|XP_008784866.1|7.34E-115PREDICTED: LOW QUALITY PROTEIN: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like [Phoenix dactylifera]
Swissprottr|Q0D5B9|SAP16_ORYSJ9.00E-112Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
trEMBLtr|C5XBR1|C5XBR1_SORBI9.00E-113Putative uncharacterized protein Sb02g036840 {ECO:0000313|EMBL:EER97405.1}
TAIRAT3G574801.00E-71zinc finger (C2H2 type, AN1-like) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000113234403237240+
Transcript Sequence

Network for GWHGAAEX001749

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01428.15zf-AN113484.20E-10
PF01428.15zf-AN11001403.90E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.830
SRR2545915Juvenile tuber18.130
SRP108465SRR5643513five period of Gastrodia elata26.200
SRR5643514five period of Gastrodia elata41.650
SRR5643515five period of Gastrodia elata24.090
SRR5643524five period of Gastrodia elata41.150
SRR5643525five period of Gastrodia elata35.580
SRR5643528five period of Gastrodia elata28.070
SRR5643658five period of Gastrodia elata53.340
SRR5643659five period of Gastrodia elata18.260
SRR5643660five period of Gastrodia elata15.340
SRR5643661five period of Gastrodia elata17.770
SRR5643662five period of Gastrodia elata13.070
SRR5643663five period of Gastrodia elata17.860
SRR5643664five period of Gastrodia elata11.690
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.320
SRR6049655Rhizomagastrodiae_C368-T10_good_136.610
SRR6049656Rhizomagastrodiae_C368-T07_good_123.310
SRR6049657Rhizomagastrodiae_C368-T07_good_113.060
SRR6049658Rhizomagastrodiae_C368-T04_good_117.650
SRR6049659Rhizomagastrodiae_C368-T04_good_114.860
SRR6049660Rhizomagastrodiae_C368-T01_good_114.200
SRR6049661Rhizomagastrodiae_C368-T04_good_113.500
SRR6049662Rhizomagastrodiae_C368-T01_good_125.820
SRR6049663Rhizomagastrodiae_C368-T01_good_126.280
SRR6049664Rhizomagastrodiae_C368-T10_good_135.860
SRR6049665Rhizomagastrodiae_C368-T10_good_135.860
SRP279888GastroGastrodia elata tuber 10.81
JuvenJuvenile tuber34.70
Mother_GastroMother tuber of Gastrodia elata 28.79
Mother_JuvenMother tuber of Juvenile 18.58