Detail information of GWHGAAEX001592/evm.TU.scaffold_110.20


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|124502516|gb|ABN13632.1|0polyphenol oxidase [Doritis pulcherrima x Phalaenopsis hybrid cultivar]
Swissprottr|P43309|PPO_MALDO0Polyphenol oxidase, chloroplastic (Precursor)
trEMBLtr|A3F9I9|A3F9I9_9ASPA0Polyphenol oxidase {ECO:0000313|EMBL:ABN13632.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000110818882821169-
Transcript Sequence

Network for GWHGAAEX001592

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4AP2/ERF-ERF_EAR_family AP2/ERF-ERF_EAR_family
GO:0003700 transcription factor activity, sequence-specific DNA binding GOslim:molecular_function
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0016491 oxidoreductase activity GOslim:molecular_function
GO:0016758 transferase activity, transferring hexosyl groups GOslim:molecular_function
GO:0043565 sequence-specific DNA binding GOslim:molecular_function
map00561 Glycerolipid metabolism
map04923 Regulation of lipolysis in adipocytes
Transcription factor AP2/ERF-ERF Family Transcription factor AP2/ERF-ERF Family
Transcription factor LOB Family Transcription factor LOB Family
Transcription factor MYB Family Transcription factor MYB Family
Transcription factor NAC Family Transcription factor NAC Family
Transcription factor Tify Family Transcription factor Tify Family
Transcription factor WRKY Family Transcription factor WRKY Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00264.19Tyrosinase1443527.50E-34
PF12142.7PPO1_DWL3574062.90E-26
PF12143.7PPO1_KFDV4315522.90E-34
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00422E1.10.3.1 Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Tyrosine metabolismmap00350
Isoquinoline alkaloid biosynthesismap00950

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0046148Biological Processpigment biosynthetic process
GO:0004097Molecular Functioncatechol oxidase activity
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.350
SRR2545915Juvenile tuber12.630
SRP108465SRR5643513five period of Gastrodia elata8.480
SRR5643514five period of Gastrodia elata18.680
SRR5643515five period of Gastrodia elata10.500
SRR5643524five period of Gastrodia elata15.230
SRR5643525five period of Gastrodia elata47.910
SRR5643528five period of Gastrodia elata9.000
SRR5643658five period of Gastrodia elata2.080
SRR5643659five period of Gastrodia elata32.480
SRR5643660five period of Gastrodia elata25.570
SRR5643661five period of Gastrodia elata49.010
SRR5643662five period of Gastrodia elata22.340
SRR5643663five period of Gastrodia elata29.970
SRR5643664five period of Gastrodia elata33.090
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_12.420
SRR6049655Rhizomagastrodiae_C368-T10_good_12.460
SRR6049656Rhizomagastrodiae_C368-T07_good_13.360
SRR6049657Rhizomagastrodiae_C368-T07_good_11.090
SRR6049658Rhizomagastrodiae_C368-T04_good_12.560
SRR6049659Rhizomagastrodiae_C368-T04_good_14.250
SRR6049660Rhizomagastrodiae_C368-T01_good_18.400
SRR6049661Rhizomagastrodiae_C368-T04_good_11.370
SRR6049662Rhizomagastrodiae_C368-T01_good_128.250
SRR6049663Rhizomagastrodiae_C368-T01_good_121.270
SRR6049664Rhizomagastrodiae_C368-T10_good_14.970
SRR6049665Rhizomagastrodiae_C368-T10_good_14.970
SRP279888GastroGastrodia elata tuber 17.51
JuvenJuvenile tuber20.00
Mother_GastroMother tuber of Gastrodia elata 200.08
Mother_JuvenMother tuber of Juvenile 142.48