Detail information of GWHGAAEX000008/evm.TU.scaffold_0.12


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG31834.00E-98Predicted Zn-finger protein
nrgi|672123035|ref|XP_008784866.1|2.30E-132PREDICTED: LOW QUALITY PROTEIN: zinc finger AN1 and C2H2 domain-containing stress-associated protein 16-like [Phoenix dactylifera]
Swissprottr|Q0D5B9|SAP16_ORYSJ2.00E-123Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16
trEMBLtr|J3MM73|J3MM73_ORYBR1.00E-124Uncharacterized protein {ECO:0000313|EnsemblPlants:OB07G25050.1}
TAIRAT3G574804.00E-98zinc finger (C2H2 type, AN1-like) family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000014833325849566+
Transcript Sequence

Network for GWHGAAEX000008

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1GO:0003677 DNA binding GOslim:molecular_function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds GOslim:molecular_function
GO:0004857 enzyme inhibitor activity GOslim:molecular_function
GO:0005975 carbohydrate metabolic process GOslim:biological_process
GO:0006355 regulation of transcription, DNA-templated GOslim:biological_process
GO:0006629 lipid metabolic process GOslim:biological_process
GO:0008081 phosphoric diester hydrolase activity GOslim:molecular_function
GO:0008234 cysteine-type peptidase activity GOslim:molecular_function
GO:0009055 electron carrier activity GOslim:molecular_function
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity GOslim:molecular_function
GO:0015035 protein disulfide oxidoreductase activity GOslim:molecular_function
GO:0015267 channel activity GOslim:molecular_function
GO:0016020 membrane GOslim:cellular_component
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen GOslim:molecular_function
GO:0016757 transferase activity, transferring glycosyl groups GOslim:molecular_function
GO:0046556 alpha-L-arabinofuranosidase activity GOslim:molecular_function
GO:0046983 protein dimerization activity GOslim:molecular_function
Transcription factor AUX/IAA Family Transcription factor AUX/IAA Family
Transcription factor C2C2-Dof Family Transcription factor C2C2-Dof Family
Transcription factor NAC Family Transcription factor NAC Family

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01428.15zf-AN113512.30E-13
PF01428.15zf-AN11011399.20E-08
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.880
SRR2545915Juvenile tuber15.200
SRP108465SRR5643513five period of Gastrodia elata14.540
SRR5643514five period of Gastrodia elata17.220
SRR5643515five period of Gastrodia elata20.850
SRR5643524five period of Gastrodia elata18.040
SRR5643525five period of Gastrodia elata46.310
SRR5643528five period of Gastrodia elata49.730
SRR5643658five period of Gastrodia elata36.750
SRR5643659five period of Gastrodia elata17.690
SRR5643660five period of Gastrodia elata16.320
SRR5643661five period of Gastrodia elata17.730
SRR5643662five period of Gastrodia elata21.380
SRR5643663five period of Gastrodia elata15.020
SRR5643664five period of Gastrodia elata15.370
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_114.470
SRR6049655Rhizomagastrodiae_C368-T10_good_122.320
SRR6049656Rhizomagastrodiae_C368-T07_good_117.900
SRR6049657Rhizomagastrodiae_C368-T07_good_112.490
SRR6049658Rhizomagastrodiae_C368-T04_good_117.590
SRR6049659Rhizomagastrodiae_C368-T04_good_119.640
SRR6049660Rhizomagastrodiae_C368-T01_good_118.640
SRR6049661Rhizomagastrodiae_C368-T04_good_114.240
SRR6049662Rhizomagastrodiae_C368-T01_good_115.810
SRR6049663Rhizomagastrodiae_C368-T01_good_121.690
SRR6049664Rhizomagastrodiae_C368-T10_good_119.110
SRR6049665Rhizomagastrodiae_C368-T10_good_119.110
SRP279888GastroGastrodia elata tuber 12.57
JuvenJuvenile tuber8.11
Mother_GastroMother tuber of Gastrodia elata 47.33
Mother_JuvenMother tuber of Juvenile 21.42